Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF546Q86UE3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF546Q86UE3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
ZNF546Q86UE3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF546Q86UE3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF546Q86UE3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF546Q86UE3 AC092068.2-201ENST00000590491 1708 ntBASIC18.89■□□□□ 0.61
ZNF546Q86UE3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF546Q86UE3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ZNF546Q86UE3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF546Q86UE3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ZNF546Q86UE3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF546Q86UE3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ZNF546Q86UE3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.89■□□□□ 0.61
ZNF546Q86UE3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF546Q86UE3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ZNF546Q86UE3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNF546Q86UE3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF546Q86UE3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF546Q86UE3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF546Q86UE3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF546Q86UE3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ZNF546Q86UE3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF546Q86UE3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF546Q86UE3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF546Q86UE3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNF546Q86UE3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF546Q86UE3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF546Q86UE3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ZNF546Q86UE3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF546Q86UE3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF546Q86UE3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.87■□□□□ 0.61
ZNF546Q86UE3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ZNF546Q86UE3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF546Q86UE3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ZNF546Q86UE3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF546Q86UE3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF546Q86UE3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.86■□□□□ 0.61
ZNF546Q86UE3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ZNF546Q86UE3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF546Q86UE3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF546Q86UE3 AC242852.2-201ENST00000615738 1807 ntBASIC18.86■□□□□ 0.61
ZNF546Q86UE3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
ZNF546Q86UE3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
ZNF546Q86UE3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF546Q86UE3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF546Q86UE3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ZNF546Q86UE3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF546Q86UE3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF546Q86UE3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ZNF546Q86UE3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF546Q86UE3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ZNF546Q86UE3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF546Q86UE3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF546Q86UE3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF546Q86UE3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF546Q86UE3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ZNF546Q86UE3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF546Q86UE3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ZNF546Q86UE3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF546Q86UE3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF546Q86UE3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF546Q86UE3 AC008813.1-201ENST00000536597 885 ntBASIC18.84■□□□□ 0.61
ZNF546Q86UE3 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.84■□□□□ 0.61
ZNF546Q86UE3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ZNF546Q86UE3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF546Q86UE3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF546Q86UE3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.83■□□□□ 0.61
ZNF546Q86UE3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF546Q86UE3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.83■□□□□ 0.61
ZNF546Q86UE3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF546Q86UE3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.83■□□□□ 0.61
ZNF546Q86UE3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.83■□□□□ 0.6
ZNF546Q86UE3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.83■□□□□ 0.6
ZNF546Q86UE3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.83■□□□□ 0.6
ZNF546Q86UE3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF546Q86UE3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.83■□□□□ 0.6
ZNF546Q86UE3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF546Q86UE3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
ZNF546Q86UE3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF546Q86UE3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF546Q86UE3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF546Q86UE3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF546Q86UE3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZNF546Q86UE3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF546Q86UE3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF546Q86UE3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF546Q86UE3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ZNF546Q86UE3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF546Q86UE3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF546Q86UE3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF546Q86UE3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF546Q86UE3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF546Q86UE3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF546Q86UE3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
ZNF546Q86UE3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ZNF546Q86UE3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF546Q86UE3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF546Q86UE3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF546Q86UE3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms