Protein–RNA interactions for Protein: Q6PKG0

LARP1, La-related protein 1, humanhuman

Known RBP Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP1Q6PKG0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC30.55■■■□□ 2.48
LARP1Q6PKG0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
LARP1Q6PKG0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
LARP1Q6PKG0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LARP1Q6PKG0 AC004911.1-201ENST00000416316 871 ntBASIC30.55■■■□□ 2.48
LARP1Q6PKG0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC30.55■■■□□ 2.48
LARP1Q6PKG0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LARP1Q6PKG0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
LARP1Q6PKG0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
LARP1Q6PKG0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
LARP1Q6PKG0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC30.54■■■□□ 2.48
LARP1Q6PKG0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
LARP1Q6PKG0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.54■■■□□ 2.48
LARP1Q6PKG0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
LARP1Q6PKG0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
LARP1Q6PKG0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
LARP1Q6PKG0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC30.54■■■□□ 2.48
LARP1Q6PKG0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
LARP1Q6PKG0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
LARP1Q6PKG0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
LARP1Q6PKG0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC30.53■■■□□ 2.48
LARP1Q6PKG0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
LARP1Q6PKG0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC30.52■■■□□ 2.48
LARP1Q6PKG0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC30.52■■■□□ 2.48
LARP1Q6PKG0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC30.52■■■□□ 2.48
LARP1Q6PKG0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
LARP1Q6PKG0 AC126544.1-201ENST00000580842 1059 ntBASIC30.52■■■□□ 2.48
LARP1Q6PKG0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
LARP1Q6PKG0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
LARP1Q6PKG0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
LARP1Q6PKG0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC30.51■■■□□ 2.48
LARP1Q6PKG0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.51■■■□□ 2.47
LARP1Q6PKG0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
LARP1Q6PKG0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC30.51■■■□□ 2.47
LARP1Q6PKG0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC30.51■■■□□ 2.47
LARP1Q6PKG0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
LARP1Q6PKG0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
LARP1Q6PKG0 TSPY26P-201ENST00000476365 1326 ntBASIC30.5■■■□□ 2.47
LARP1Q6PKG0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
LARP1Q6PKG0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
LARP1Q6PKG0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC30.5■■■□□ 2.47
LARP1Q6PKG0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
LARP1Q6PKG0 ID1-201ENST00000376105 1233 ntBASIC30.5■■■□□ 2.47
LARP1Q6PKG0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
LARP1Q6PKG0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC30.5■■■□□ 2.47
LARP1Q6PKG0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.5■■■□□ 2.47
LARP1Q6PKG0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
LARP1Q6PKG0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
LARP1Q6PKG0 NME4-202ENST00000382940 766 ntTSL 3 BASIC30.49■■■□□ 2.47
LARP1Q6PKG0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC30.49■■■□□ 2.47
LARP1Q6PKG0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC30.49■■■□□ 2.47
LARP1Q6PKG0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC30.49■■■□□ 2.47
LARP1Q6PKG0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
LARP1Q6PKG0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
LARP1Q6PKG0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC30.48■■■□□ 2.47
LARP1Q6PKG0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.48■■■□□ 2.47
LARP1Q6PKG0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC30.48■■■□□ 2.47
LARP1Q6PKG0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
LARP1Q6PKG0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.48■■■□□ 2.47
LARP1Q6PKG0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC30.48■■■□□ 2.47
LARP1Q6PKG0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
LARP1Q6PKG0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC30.48■■■□□ 2.47
LARP1Q6PKG0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC30.48■■■□□ 2.47
LARP1Q6PKG0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC30.48■■■□□ 2.47
LARP1Q6PKG0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
LARP1Q6PKG0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
LARP1Q6PKG0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC30.47■■■□□ 2.47
LARP1Q6PKG0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC30.47■■■□□ 2.47
LARP1Q6PKG0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.47■■■□□ 2.47
LARP1Q6PKG0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
LARP1Q6PKG0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC30.47■■■□□ 2.47
LARP1Q6PKG0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC30.47■■■□□ 2.47
LARP1Q6PKG0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
LARP1Q6PKG0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC30.46■■■□□ 2.47
LARP1Q6PKG0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC30.46■■■□□ 2.47
LARP1Q6PKG0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.46■■■□□ 2.47
LARP1Q6PKG0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
LARP1Q6PKG0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
LARP1Q6PKG0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC30.46■■■□□ 2.47
LARP1Q6PKG0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
LARP1Q6PKG0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
LARP1Q6PKG0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
LARP1Q6PKG0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30.45■■■□□ 2.47
LARP1Q6PKG0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
LARP1Q6PKG0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
LARP1Q6PKG0 AC027612.3-201ENST00000413684 1047 ntBASIC30.45■■■□□ 2.47
LARP1Q6PKG0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
LARP1Q6PKG0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
LARP1Q6PKG0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC30.45■■■□□ 2.46
LARP1Q6PKG0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.46
LARP1Q6PKG0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.45■■■□□ 2.46
LARP1Q6PKG0 AL022069.1-201ENST00000568025 1636 ntBASIC30.44■■■□□ 2.46
LARP1Q6PKG0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.44■■■□□ 2.46
LARP1Q6PKG0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
LARP1Q6PKG0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
LARP1Q6PKG0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
LARP1Q6PKG0 MIR6084-201ENST00000622012 110 ntBASIC30.44■■■□□ 2.46
LARP1Q6PKG0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC30.44■■■□□ 2.46
LARP1Q6PKG0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
LARP1Q6PKG0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms