Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
C11orf88Q6PI97 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.65■□□□□ 0.74
C11orf88Q6PI97 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
C11orf88Q6PI97 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.64■□□□□ 0.74
C11orf88Q6PI97 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C11orf88Q6PI97 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
C11orf88Q6PI97 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.64■□□□□ 0.73
C11orf88Q6PI97 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C11orf88Q6PI97 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
C11orf88Q6PI97 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C11orf88Q6PI97 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C11orf88Q6PI97 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
C11orf88Q6PI97 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.64■□□□□ 0.73
C11orf88Q6PI97 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
C11orf88Q6PI97 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.63■□□□□ 0.73
C11orf88Q6PI97 SMPD5-203ENST00000639008 1464 ntBASIC19.63■□□□□ 0.73
C11orf88Q6PI97 KRT18P60-201ENST00000312876 1297 ntBASIC19.63■□□□□ 0.73
C11orf88Q6PI97 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.63■□□□□ 0.73
C11orf88Q6PI97 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
C11orf88Q6PI97 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C11orf88Q6PI97 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.63■□□□□ 0.73
C11orf88Q6PI97 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C11orf88Q6PI97 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.62■□□□□ 0.73
C11orf88Q6PI97 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
C11orf88Q6PI97 LINC00565-201ENST00000562710 2331 ntBASIC19.62■□□□□ 0.73
C11orf88Q6PI97 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C11orf88Q6PI97 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C11orf88Q6PI97 AL033527.3-201ENST00000566366 1196 ntBASIC19.62■□□□□ 0.73
C11orf88Q6PI97 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.62■□□□□ 0.73
C11orf88Q6PI97 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.62■□□□□ 0.73
C11orf88Q6PI97 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
C11orf88Q6PI97 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
C11orf88Q6PI97 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C11orf88Q6PI97 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
C11orf88Q6PI97 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C11orf88Q6PI97 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
C11orf88Q6PI97 ATP5G2P3-201ENST00000429083 425 ntBASIC19.61■□□□□ 0.73
C11orf88Q6PI97 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
C11orf88Q6PI97 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.61■□□□□ 0.73
C11orf88Q6PI97 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C11orf88Q6PI97 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
C11orf88Q6PI97 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.61■□□□□ 0.73
C11orf88Q6PI97 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
C11orf88Q6PI97 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.6■□□□□ 0.73
C11orf88Q6PI97 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.6■□□□□ 0.73
C11orf88Q6PI97 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C11orf88Q6PI97 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
C11orf88Q6PI97 AC233723.2-201ENST00000623798 2106 ntBASIC19.6■□□□□ 0.73
C11orf88Q6PI97 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
C11orf88Q6PI97 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
C11orf88Q6PI97 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.6■□□□□ 0.73
C11orf88Q6PI97 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
C11orf88Q6PI97 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
C11orf88Q6PI97 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C11orf88Q6PI97 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.6■□□□□ 0.73
C11orf88Q6PI97 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C11orf88Q6PI97 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C11orf88Q6PI97 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
C11orf88Q6PI97 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C11orf88Q6PI97 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C11orf88Q6PI97 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
C11orf88Q6PI97 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
C11orf88Q6PI97 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C11orf88Q6PI97 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C11orf88Q6PI97 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
C11orf88Q6PI97 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C11orf88Q6PI97 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
C11orf88Q6PI97 AC004987.1-201ENST00000428627 508 ntBASIC19.58■□□□□ 0.72
C11orf88Q6PI97 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
C11orf88Q6PI97 AC025884.2-201ENST00000553429 711 ntBASIC19.58■□□□□ 0.72
C11orf88Q6PI97 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
C11orf88Q6PI97 EP400NL-214ENST00000641289 2402 ntBASIC19.58■□□□□ 0.72
C11orf88Q6PI97 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C11orf88Q6PI97 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.58■□□□□ 0.72
C11orf88Q6PI97 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
C11orf88Q6PI97 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C11orf88Q6PI97 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.58■□□□□ 0.72
C11orf88Q6PI97 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.58■□□□□ 0.72
C11orf88Q6PI97 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.58■□□□□ 0.72
C11orf88Q6PI97 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.58■□□□□ 0.72
C11orf88Q6PI97 AL359504.2-201ENST00000605506 1601 ntBASIC19.58■□□□□ 0.72
C11orf88Q6PI97 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
C11orf88Q6PI97 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.57■□□□□ 0.72
C11orf88Q6PI97 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
C11orf88Q6PI97 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.57■□□□□ 0.72
C11orf88Q6PI97 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
C11orf88Q6PI97 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C11orf88Q6PI97 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C11orf88Q6PI97 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C11orf88Q6PI97 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C11orf88Q6PI97 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
C11orf88Q6PI97 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
C11orf88Q6PI97 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
C11orf88Q6PI97 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C11orf88Q6PI97 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
C11orf88Q6PI97 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
C11orf88Q6PI97 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
C11orf88Q6PI97 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C11orf88Q6PI97 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
C11orf88Q6PI97 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms