Protein–RNA interactions for Protein: Q5VVS0

C1orf140, Putative uncharacterized protein C1orf140, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf140Q5VVS0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
C1orf140Q5VVS0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
C1orf140Q5VVS0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.56■□□□□ 0.88
C1orf140Q5VVS0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.56■□□□□ 0.88
C1orf140Q5VVS0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
C1orf140Q5VVS0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C1orf140Q5VVS0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C1orf140Q5VVS0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
C1orf140Q5VVS0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.56■□□□□ 0.88
C1orf140Q5VVS0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
C1orf140Q5VVS0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.56■□□□□ 0.88
C1orf140Q5VVS0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 Z92544.1-202ENST00000571933 1220 ntBASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 AL451085.2-201ENST00000605085 799 ntBASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1orf140Q5VVS0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1orf140Q5VVS0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
C1orf140Q5VVS0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.54■□□□□ 0.88
C1orf140Q5VVS0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.54■□□□□ 0.88
C1orf140Q5VVS0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.54■□□□□ 0.88
C1orf140Q5VVS0 AC009299.2-201ENST00000482477 511 ntBASIC20.54■□□□□ 0.88
C1orf140Q5VVS0 KRT125P-201ENST00000546827 989 ntBASIC20.54■□□□□ 0.88
C1orf140Q5VVS0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.54■□□□□ 0.88
C1orf140Q5VVS0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
C1orf140Q5VVS0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1orf140Q5VVS0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1orf140Q5VVS0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C1orf140Q5VVS0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.53■□□□□ 0.88
C1orf140Q5VVS0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
C1orf140Q5VVS0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
C1orf140Q5VVS0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.53■□□□□ 0.88
C1orf140Q5VVS0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C1orf140Q5VVS0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C1orf140Q5VVS0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
C1orf140Q5VVS0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.53■□□□□ 0.88
C1orf140Q5VVS0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
C1orf140Q5VVS0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.52■□□□□ 0.88
C1orf140Q5VVS0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
C1orf140Q5VVS0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C1orf140Q5VVS0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.52■□□□□ 0.88
C1orf140Q5VVS0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C1orf140Q5VVS0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.52■□□□□ 0.88
C1orf140Q5VVS0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C1orf140Q5VVS0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
C1orf140Q5VVS0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
C1orf140Q5VVS0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1orf140Q5VVS0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C1orf140Q5VVS0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
C1orf140Q5VVS0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1orf140Q5VVS0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1orf140Q5VVS0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.51■□□□□ 0.87
C1orf140Q5VVS0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.51■□□□□ 0.87
C1orf140Q5VVS0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.51■□□□□ 0.87
C1orf140Q5VVS0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.51■□□□□ 0.87
C1orf140Q5VVS0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.51■□□□□ 0.87
C1orf140Q5VVS0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C1orf140Q5VVS0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C1orf140Q5VVS0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C1orf140Q5VVS0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C1orf140Q5VVS0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
C1orf140Q5VVS0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
C1orf140Q5VVS0 AC239859.2-201ENST00000444165 318 ntBASIC20.5■□□□□ 0.87
C1orf140Q5VVS0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
C1orf140Q5VVS0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
C1orf140Q5VVS0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C1orf140Q5VVS0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 MIR4787-201ENST00000607364 84 ntBASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 AC092028.1-203ENST00000608262 953 ntBASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C1orf140Q5VVS0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.48■□□□□ 0.87
C1orf140Q5VVS0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
C1orf140Q5VVS0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms