Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.65■□□□□ 0.74
ATPAF1Q5TC12 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATPAF1Q5TC12 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.65■□□□□ 0.74
ATPAF1Q5TC12 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ATPAF1Q5TC12 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATPAF1Q5TC12 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.64■□□□□ 0.74
ATPAF1Q5TC12 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF1Q5TC12 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ATPAF1Q5TC12 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
ATPAF1Q5TC12 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF1Q5TC12 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.64■□□□□ 0.73
ATPAF1Q5TC12 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF1Q5TC12 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF1Q5TC12 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.64■□□□□ 0.73
ATPAF1Q5TC12 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF1Q5TC12 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF1Q5TC12 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ATPAF1Q5TC12 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ATPAF1Q5TC12 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF1Q5TC12 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF1Q5TC12 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ATPAF1Q5TC12 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.63■□□□□ 0.73
ATPAF1Q5TC12 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATPAF1Q5TC12 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.63■□□□□ 0.73
ATPAF1Q5TC12 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
ATPAF1Q5TC12 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATPAF1Q5TC12 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.62■□□□□ 0.73
ATPAF1Q5TC12 MIR6089-201ENST00000616698 64 ntBASIC19.62■□□□□ 0.73
ATPAF1Q5TC12 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.62■□□□□ 0.73
ATPAF1Q5TC12 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATPAF1Q5TC12 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATPAF1Q5TC12 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF1Q5TC12 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF1Q5TC12 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF1Q5TC12 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF1Q5TC12 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF1Q5TC12 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATPAF1Q5TC12 AC103834.1-201ENST00000520383 144 ntBASIC19.61■□□□□ 0.73
ATPAF1Q5TC12 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.61■□□□□ 0.73
ATPAF1Q5TC12 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.61■□□□□ 0.73
ATPAF1Q5TC12 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATPAF1Q5TC12 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.61■□□□□ 0.73
ATPAF1Q5TC12 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATPAF1Q5TC12 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.59■□□□□ 0.73
ATPAF1Q5TC12 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATPAF1Q5TC12 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATPAF1Q5TC12 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
ATPAF1Q5TC12 KRT18P24-201ENST00000344739 1156 ntBASIC19.59■□□□□ 0.73
ATPAF1Q5TC12 YBX1P4-201ENST00000392794 808 ntBASIC19.59■□□□□ 0.73
ATPAF1Q5TC12 AC011551.1-201ENST00000614101 683 ntBASIC19.59■□□□□ 0.73
ATPAF1Q5TC12 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATPAF1Q5TC12 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATPAF1Q5TC12 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATPAF1Q5TC12 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.59■□□□□ 0.73
ATPAF1Q5TC12 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
ATPAF1Q5TC12 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATPAF1Q5TC12 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATPAF1Q5TC12 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATPAF1Q5TC12 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATPAF1Q5TC12 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ATPAF1Q5TC12 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATPAF1Q5TC12 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.58■□□□□ 0.72
ATPAF1Q5TC12 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.58■□□□□ 0.72
ATPAF1Q5TC12 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
ATPAF1Q5TC12 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ATPAF1Q5TC12 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
ATPAF1Q5TC12 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATPAF1Q5TC12 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATPAF1Q5TC12 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.58■□□□□ 0.72
ATPAF1Q5TC12 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.57■□□□□ 0.72
ATPAF1Q5TC12 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
ATPAF1Q5TC12 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATPAF1Q5TC12 AC090877.2-201ENST00000558441 1738 ntBASIC19.57■□□□□ 0.72
ATPAF1Q5TC12 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATPAF1Q5TC12 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.57■□□□□ 0.72
ATPAF1Q5TC12 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ATPAF1Q5TC12 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.57■□□□□ 0.72
ATPAF1Q5TC12 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATPAF1Q5TC12 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.57■□□□□ 0.72
ATPAF1Q5TC12 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.57■□□□□ 0.72
ATPAF1Q5TC12 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms