Protein–RNA interactions for Protein: Q3LI81

KRTAP27-1, Keratin-associated protein 27-1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP27-1Q3LI81 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KRTAP27-1Q3LI81 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRTAP27-1Q3LI81 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KRTAP27-1Q3LI81 Z92544.1-202ENST00000571933 1220 ntBASIC19.74■□□□□ 0.75
KRTAP27-1Q3LI81 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
KRTAP27-1Q3LI81 AC092068.2-201ENST00000590491 1708 ntBASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 BX664725.1-201ENST00000438252 379 ntBASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
KRTAP27-1Q3LI81 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRTAP27-1Q3LI81 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRTAP27-1Q3LI81 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRTAP27-1Q3LI81 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRTAP27-1Q3LI81 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.72■□□□□ 0.75
KRTAP27-1Q3LI81 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.72■□□□□ 0.75
KRTAP27-1Q3LI81 MIR6722-201ENST00000617286 78 ntBASIC19.72■□□□□ 0.75
KRTAP27-1Q3LI81 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
KRTAP27-1Q3LI81 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRTAP27-1Q3LI81 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRTAP27-1Q3LI81 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRTAP27-1Q3LI81 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.72■□□□□ 0.75
KRTAP27-1Q3LI81 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.72■□□□□ 0.75
KRTAP27-1Q3LI81 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRTAP27-1Q3LI81 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.71■□□□□ 0.75
KRTAP27-1Q3LI81 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRTAP27-1Q3LI81 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.71■□□□□ 0.75
KRTAP27-1Q3LI81 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRTAP27-1Q3LI81 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRTAP27-1Q3LI81 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.71■□□□□ 0.75
KRTAP27-1Q3LI81 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.71■□□□□ 0.75
KRTAP27-1Q3LI81 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.71■□□□□ 0.75
KRTAP27-1Q3LI81 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRTAP27-1Q3LI81 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 AL451085.2-201ENST00000605085 799 ntBASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRTAP27-1Q3LI81 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 AC009299.2-201ENST00000482477 511 ntBASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRTAP27-1Q3LI81 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 AC092028.1-203ENST00000608262 953 ntBASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRTAP27-1Q3LI81 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRTAP27-1Q3LI81 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms