Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RASGEF1BQ0VAM2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RASGEF1BQ0VAM2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RASGEF1BQ0VAM2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RASGEF1BQ0VAM2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.59■□□□□ 0.89
RASGEF1BQ0VAM2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.59■□□□□ 0.89
RASGEF1BQ0VAM2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RASGEF1BQ0VAM2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.59■□□□□ 0.89
RASGEF1BQ0VAM2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RASGEF1BQ0VAM2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RASGEF1BQ0VAM2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RASGEF1BQ0VAM2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.58■□□□□ 0.89
RASGEF1BQ0VAM2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.58■□□□□ 0.89
RASGEF1BQ0VAM2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RASGEF1BQ0VAM2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.58■□□□□ 0.89
RASGEF1BQ0VAM2 TSPY9P-201ENST00000440215 945 ntBASIC20.58■□□□□ 0.89
RASGEF1BQ0VAM2 TSPY11P-201ENST00000442607 1045 ntBASIC20.58■□□□□ 0.89
RASGEF1BQ0VAM2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.58■□□□□ 0.89
RASGEF1BQ0VAM2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RASGEF1BQ0VAM2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RASGEF1BQ0VAM2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RASGEF1BQ0VAM2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RASGEF1BQ0VAM2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RASGEF1BQ0VAM2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RASGEF1BQ0VAM2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
RASGEF1BQ0VAM2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RASGEF1BQ0VAM2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
RASGEF1BQ0VAM2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.57■□□□□ 0.88
RASGEF1BQ0VAM2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.57■□□□□ 0.88
RASGEF1BQ0VAM2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.57■□□□□ 0.88
RASGEF1BQ0VAM2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RASGEF1BQ0VAM2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RASGEF1BQ0VAM2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RASGEF1BQ0VAM2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 AC012676.1-201ENST00000574705 1949 ntBASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 AL022069.1-201ENST00000568025 1636 ntBASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RASGEF1BQ0VAM2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RASGEF1BQ0VAM2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
RASGEF1BQ0VAM2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RASGEF1BQ0VAM2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RASGEF1BQ0VAM2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.55■□□□□ 0.88
RASGEF1BQ0VAM2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.55■□□□□ 0.88
RASGEF1BQ0VAM2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.55■□□□□ 0.88
RASGEF1BQ0VAM2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.55■□□□□ 0.88
RASGEF1BQ0VAM2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.55■□□□□ 0.88
RASGEF1BQ0VAM2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.55■□□□□ 0.88
RASGEF1BQ0VAM2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.55■□□□□ 0.88
RASGEF1BQ0VAM2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 AC131274.2-201ENST00000580697 1507 ntBASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 SNX5-217ENST00000606557 1087 ntBASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 AC004812.2-201ENST00000611079 2094 ntBASIC20.54■□□□□ 0.88
RASGEF1BQ0VAM2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RASGEF1BQ0VAM2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RASGEF1BQ0VAM2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RASGEF1BQ0VAM2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.53■□□□□ 0.88
RASGEF1BQ0VAM2 AC004448.1-201ENST00000458332 883 ntBASIC20.53■□□□□ 0.88
RASGEF1BQ0VAM2 UNC93B8-201ENST00000511903 705 ntBASIC20.53■□□□□ 0.88
RASGEF1BQ0VAM2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RASGEF1BQ0VAM2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RASGEF1BQ0VAM2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.53■□□□□ 0.88
RASGEF1BQ0VAM2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RASGEF1BQ0VAM2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RASGEF1BQ0VAM2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RASGEF1BQ0VAM2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.52■□□□□ 0.88
RASGEF1BQ0VAM2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.52■□□□□ 0.88
RASGEF1BQ0VAM2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RASGEF1BQ0VAM2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RASGEF1BQ0VAM2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RASGEF1BQ0VAM2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RASGEF1BQ0VAM2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.52■□□□□ 0.88
RASGEF1BQ0VAM2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
RASGEF1BQ0VAM2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.52■□□□□ 0.88
RASGEF1BQ0VAM2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.52■□□□□ 0.88
RASGEF1BQ0VAM2 MTDHP2-201ENST00000601468 714 ntBASIC20.52■□□□□ 0.88
RASGEF1BQ0VAM2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.52■□□□□ 0.88
RASGEF1BQ0VAM2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RASGEF1BQ0VAM2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
RASGEF1BQ0VAM2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms