Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 AC139795.1-202ENST00000500444 432 ntBASIC17.29■□□□□ 0.36
HIST1H1AQ02539 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1AQ02539 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1AQ02539 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HIST1H1AQ02539 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1AQ02539 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1AQ02539 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1AQ02539 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HIST1H1AQ02539 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
HIST1H1AQ02539 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.28■□□□□ 0.36
HIST1H1AQ02539 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1AQ02539 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1AQ02539 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1AQ02539 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1AQ02539 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1AQ02539 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1AQ02539 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1AQ02539 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1AQ02539 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1AQ02539 DUX4L18-201ENST00000553347 1267 ntBASIC17.27■□□□□ 0.36
HIST1H1AQ02539 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.27■□□□□ 0.36
HIST1H1AQ02539 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1AQ02539 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HIST1H1AQ02539 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H1AQ02539 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
HIST1H1AQ02539 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H1AQ02539 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H1AQ02539 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1AQ02539 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1AQ02539 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.26■□□□□ 0.35
HIST1H1AQ02539 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H1AQ02539 NTF6A-201ENST00000591175 560 ntBASIC17.26■□□□□ 0.35
HIST1H1AQ02539 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1AQ02539 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
HIST1H1AQ02539 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
HIST1H1AQ02539 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1AQ02539 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 LONRF2P2-201ENST00000439212 571 ntBASIC17.25■□□□□ 0.35
HIST1H1AQ02539 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST1H1AQ02539 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H1AQ02539 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H1AQ02539 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HIST1H1AQ02539 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H1AQ02539 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST1H1AQ02539 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST1H1AQ02539 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 BHLHE23-202ENST00000612929 1109 ntBASIC17.23■□□□□ 0.35
HIST1H1AQ02539 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST1H1AQ02539 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HIST1H1AQ02539 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H1AQ02539 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HIST1H1AQ02539 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
HIST1H1AQ02539 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H1AQ02539 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H1AQ02539 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H1AQ02539 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H1AQ02539 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H1AQ02539 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
HIST1H1AQ02539 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST1H1AQ02539 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.21■□□□□ 0.35
HIST1H1AQ02539 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
HIST1H1AQ02539 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms