Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
CKS1BP61024 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.77■□□□□ 0.11
CKS1BP61024 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS1BP61024 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKS1BP61024 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CKS1BP61024 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS1BP61024 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS1BP61024 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS1BP61024 ZNRF2P2-203ENST00000454624 420 ntBASIC15.76■□□□□ 0.11
CKS1BP61024 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS1BP61024 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC15.76■□□□□ 0.11
CKS1BP61024 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKS1BP61024 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS1BP61024 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS1BP61024 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS1BP61024 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CKS1BP61024 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS1BP61024 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS1BP61024 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS1BP61024 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS1BP61024 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKS1BP61024 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKS1BP61024 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS1BP61024 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS1BP61024 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS1BP61024 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CKS1BP61024 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS1BP61024 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CKS1BP61024 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC15.75■□□□□ 0.11
CKS1BP61024 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC15.75■□□□□ 0.11
CKS1BP61024 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC15.75■□□□□ 0.11
CKS1BP61024 MED25-210ENST00000612854 801 ntTSL 5 BASIC15.75■□□□□ 0.11
CKS1BP61024 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKS1BP61024 MED25-214ENST00000622402 642 ntTSL 5 BASIC15.75■□□□□ 0.11
CKS1BP61024 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CKS1BP61024 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CKS1BP61024 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS1BP61024 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.75■□□□□ 0.11
CKS1BP61024 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CKS1BP61024 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC15.74■□□□□ 0.11
CKS1BP61024 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CKS1BP61024 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 AC141586.4-201ENST00000624558 1573 ntBASIC15.74■□□□□ 0.11
CKS1BP61024 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CKS1BP61024 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS1BP61024 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.74■□□□□ 0.11
CKS1BP61024 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CKS1BP61024 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKS1BP61024 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKS1BP61024 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKS1BP61024 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CKS1BP61024 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.73■□□□□ 0.11
CKS1BP61024 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKS1BP61024 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC15.73■□□□□ 0.11
CKS1BP61024 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKS1BP61024 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKS1BP61024 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
CKS1BP61024 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CKS1BP61024 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKS1BP61024 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKS1BP61024 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKS1BP61024 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKS1BP61024 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CKS1BP61024 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CKS1BP61024 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS1BP61024 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.72■□□□□ 0.11
CKS1BP61024 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS1BP61024 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS1BP61024 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC15.72■□□□□ 0.11
CKS1BP61024 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CKS1BP61024 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CKS1BP61024 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.72■□□□□ 0.11
CKS1BP61024 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS1BP61024 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS1BP61024 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS1BP61024 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS1BP61024 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CKS1BP61024 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC15.72■□□□□ 0.11
CKS1BP61024 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC15.72■□□□□ 0.11
CKS1BP61024 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS1BP61024 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC15.72■□□□□ 0.11
CKS1BP61024 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CKS1BP61024 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CKS1BP61024 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKS1BP61024 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKS1BP61024 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKS1BP61024 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CKS1BP61024 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms