Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5BP61020 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.92■□□□□ 0.46
RAB5BP61020 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5BP61020 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5BP61020 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5BP61020 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5BP61020 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5BP61020 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB5BP61020 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5BP61020 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5BP61020 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RAB5BP61020 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB5BP61020 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5BP61020 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5BP61020 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RAB5BP61020 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.91■□□□□ 0.46
RAB5BP61020 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB5BP61020 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC17.91■□□□□ 0.46
RAB5BP61020 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5BP61020 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5BP61020 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5BP61020 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5BP61020 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5BP61020 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB5BP61020 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5BP61020 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB5BP61020 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RAB5BP61020 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RAB5BP61020 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB5BP61020 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RAB5BP61020 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RAB5BP61020 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB5BP61020 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB5BP61020 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB5BP61020 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RAB5BP61020 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.9■□□□□ 0.46
RAB5BP61020 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.89■□□□□ 0.46
RAB5BP61020 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB5BP61020 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB5BP61020 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB5BP61020 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB5BP61020 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RAB5BP61020 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RAB5BP61020 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB5BP61020 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.88■□□□□ 0.45
RAB5BP61020 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RAB5BP61020 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAB5BP61020 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5BP61020 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB5BP61020 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.87■□□□□ 0.45
RAB5BP61020 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAB5BP61020 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAB5BP61020 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB5BP61020 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB5BP61020 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB5BP61020 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAB5BP61020 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAB5BP61020 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5BP61020 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.86■□□□□ 0.45
RAB5BP61020 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.86■□□□□ 0.45
RAB5BP61020 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.86■□□□□ 0.45
RAB5BP61020 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5BP61020 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5BP61020 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5BP61020 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.86■□□□□ 0.45
RAB5BP61020 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.86■□□□□ 0.45
RAB5BP61020 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5BP61020 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5BP61020 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.86■□□□□ 0.45
RAB5BP61020 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.85■□□□□ 0.45
RAB5BP61020 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RAB5BP61020 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RAB5BP61020 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB5BP61020 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB5BP61020 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB5BP61020 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
RAB5BP61020 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB5BP61020 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.85■□□□□ 0.45
RAB5BP61020 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.85■□□□□ 0.45
RAB5BP61020 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAB5BP61020 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RAB5BP61020 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RAB5BP61020 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RAB5BP61020 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms