Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SPCS3P61009 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPCS3P61009 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPCS3P61009 RPS2P7-201ENST00000447334 885 ntBASIC18.41■□□□□ 0.54
SPCS3P61009 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SPCS3P61009 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPCS3P61009 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPCS3P61009 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPCS3P61009 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.41■□□□□ 0.54
SPCS3P61009 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.41■□□□□ 0.54
SPCS3P61009 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SPCS3P61009 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
SPCS3P61009 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPCS3P61009 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
SPCS3P61009 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPCS3P61009 ANOS2P-203ENST00000472227 1816 ntBASIC18.4■□□□□ 0.54
SPCS3P61009 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPCS3P61009 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPCS3P61009 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPCS3P61009 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.4■□□□□ 0.54
SPCS3P61009 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.4■□□□□ 0.54
SPCS3P61009 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPCS3P61009 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SPCS3P61009 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SPCS3P61009 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.39■□□□□ 0.54
SPCS3P61009 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SPCS3P61009 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SPCS3P61009 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.39■□□□□ 0.53
SPCS3P61009 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPCS3P61009 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPCS3P61009 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPCS3P61009 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPCS3P61009 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPCS3P61009 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.39■□□□□ 0.53
SPCS3P61009 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPCS3P61009 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPCS3P61009 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.39■□□□□ 0.53
SPCS3P61009 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPCS3P61009 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SPCS3P61009 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPCS3P61009 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.39■□□□□ 0.53
SPCS3P61009 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPCS3P61009 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.39■□□□□ 0.53
SPCS3P61009 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPCS3P61009 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.38■□□□□ 0.53
SPCS3P61009 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPCS3P61009 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPCS3P61009 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.38■□□□□ 0.53
SPCS3P61009 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPCS3P61009 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
SPCS3P61009 AL592295.1-201ENST00000400984 884 ntBASIC18.38■□□□□ 0.53
SPCS3P61009 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPCS3P61009 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.38■□□□□ 0.53
SPCS3P61009 AC018755.3-202ENST00000596210 929 ntBASIC18.38■□□□□ 0.53
SPCS3P61009 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.38■□□□□ 0.53
SPCS3P61009 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPCS3P61009 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
SPCS3P61009 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPCS3P61009 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.38■□□□□ 0.53
SPCS3P61009 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPCS3P61009 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.38■□□□□ 0.53
SPCS3P61009 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SPCS3P61009 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPCS3P61009 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPCS3P61009 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SPCS3P61009 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPCS3P61009 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SPCS3P61009 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SPCS3P61009 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPCS3P61009 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
SPCS3P61009 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPCS3P61009 AC092068.2-201ENST00000590491 1708 ntBASIC18.37■□□□□ 0.53
SPCS3P61009 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPCS3P61009 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPCS3P61009 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SPCS3P61009 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SPCS3P61009 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPCS3P61009 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPCS3P61009 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SPCS3P61009 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SPCS3P61009 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPCS3P61009 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.36■□□□□ 0.53
SPCS3P61009 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.36■□□□□ 0.53
SPCS3P61009 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SPCS3P61009 MIR4449-201ENST00000578365 66 ntBASIC18.36■□□□□ 0.53
SPCS3P61009 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.35■□□□□ 0.53
SPCS3P61009 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPCS3P61009 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.35■□□□□ 0.53
SPCS3P61009 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPCS3P61009 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPCS3P61009 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SPCS3P61009 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SPCS3P61009 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SPCS3P61009 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPCS3P61009 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.35■□□□□ 0.53
SPCS3P61009 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.35■□□□□ 0.53
SPCS3P61009 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPCS3P61009 AL117328.2-201ENST00000624617 1940 ntBASIC18.35■□□□□ 0.53
SPCS3P61009 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPCS3P61009 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms