Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PER3P56645 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PER3P56645 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PER3P56645 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PER3P56645 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PER3P56645 DUSP8P4-201ENST00000399538 1761 ntBASIC20.91■□□□□ 0.94
PER3P56645 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
PER3P56645 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PER3P56645 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.91■□□□□ 0.94
PER3P56645 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PER3P56645 AC092803.2-201ENST00000564287 1899 ntBASIC20.9■□□□□ 0.94
PER3P56645 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PER3P56645 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PER3P56645 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.9■□□□□ 0.94
PER3P56645 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.9■□□□□ 0.94
PER3P56645 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PER3P56645 SUDS3P1-201ENST00000505831 966 ntBASIC20.9■□□□□ 0.94
PER3P56645 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.9■□□□□ 0.94
PER3P56645 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.9■□□□□ 0.94
PER3P56645 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.9■□□□□ 0.94
PER3P56645 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.9■□□□□ 0.94
PER3P56645 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PER3P56645 MIR6722-201ENST00000617286 78 ntBASIC20.9■□□□□ 0.94
PER3P56645 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.9■□□□□ 0.94
PER3P56645 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.9■□□□□ 0.94
PER3P56645 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PER3P56645 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PER3P56645 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PER3P56645 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PER3P56645 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PER3P56645 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PER3P56645 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PER3P56645 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.89■□□□□ 0.93
PER3P56645 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
PER3P56645 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.89■□□□□ 0.93
PER3P56645 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PER3P56645 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.88■□□□□ 0.93
PER3P56645 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PER3P56645 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PER3P56645 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.88■□□□□ 0.93
PER3P56645 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PER3P56645 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PER3P56645 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PER3P56645 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PER3P56645 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.88■□□□□ 0.93
PER3P56645 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PER3P56645 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PER3P56645 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PER3P56645 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PER3P56645 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PER3P56645 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PER3P56645 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PER3P56645 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PER3P56645 AF131216.4-201ENST00000638924 1588 ntBASIC20.87■□□□□ 0.93
PER3P56645 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PER3P56645 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PER3P56645 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PER3P56645 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PER3P56645 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PER3P56645 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.86■□□□□ 0.93
PER3P56645 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.86■□□□□ 0.93
PER3P56645 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PER3P56645 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.86■□□□□ 0.93
PER3P56645 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PER3P56645 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PER3P56645 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PER3P56645 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PER3P56645 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
PER3P56645 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.85■□□□□ 0.93
PER3P56645 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PER3P56645 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.85■□□□□ 0.93
PER3P56645 AL031432.3-201ENST00000607698 485 ntBASIC20.85■□□□□ 0.93
PER3P56645 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PER3P56645 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PER3P56645 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PER3P56645 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PER3P56645 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PER3P56645 AC090877.2-201ENST00000558441 1738 ntBASIC20.84■□□□□ 0.93
PER3P56645 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PER3P56645 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PER3P56645 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PER3P56645 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.84■□□□□ 0.93
PER3P56645 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PER3P56645 AC105265.2-201ENST00000467189 838 ntBASIC20.84■□□□□ 0.93
PER3P56645 DUX4L19-201ENST00000557448 1267 ntBASIC20.84■□□□□ 0.93
PER3P56645 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
PER3P56645 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PER3P56645 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PER3P56645 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PER3P56645 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PER3P56645 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PER3P56645 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.83■□□□□ 0.93
PER3P56645 AC024257.2-201ENST00000549699 147 ntBASIC20.83■□□□□ 0.93
PER3P56645 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PER3P56645 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PER3P56645 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PER3P56645 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PER3P56645 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PER3P56645 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PER3P56645 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms