Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDR1P51861 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDR1P51861 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.69■■□□□ 1.54
CDR1P51861 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDR1P51861 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDR1P51861 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.69■■□□□ 1.54
CDR1P51861 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDR1P51861 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDR1P51861 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
CDR1P51861 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.68■■□□□ 1.54
CDR1P51861 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDR1P51861 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDR1P51861 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.68■■□□□ 1.54
CDR1P51861 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.68■■□□□ 1.54
CDR1P51861 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.68■■□□□ 1.54
CDR1P51861 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.68■■□□□ 1.54
CDR1P51861 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.68■■□□□ 1.54
CDR1P51861 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CDR1P51861 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDR1P51861 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDR1P51861 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC24.68■■□□□ 1.54
CDR1P51861 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CDR1P51861 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
CDR1P51861 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.68■■□□□ 1.54
CDR1P51861 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.67■■□□□ 1.54
CDR1P51861 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDR1P51861 AC022211.4-201ENST00000625094 2161 ntBASIC24.67■■□□□ 1.54
CDR1P51861 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDR1P51861 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDR1P51861 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDR1P51861 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.67■■□□□ 1.54
CDR1P51861 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDR1P51861 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDR1P51861 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
CDR1P51861 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDR1P51861 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDR1P51861 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDR1P51861 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
CDR1P51861 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.65■■□□□ 1.54
CDR1P51861 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
CDR1P51861 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.65■■□□□ 1.54
CDR1P51861 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.65■■□□□ 1.54
CDR1P51861 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.65■■□□□ 1.54
CDR1P51861 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDR1P51861 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDR1P51861 AC008406.3-201ENST00000620001 1374 ntBASIC24.65■■□□□ 1.54
CDR1P51861 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.65■■□□□ 1.54
CDR1P51861 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDR1P51861 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
CDR1P51861 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CDR1P51861 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
CDR1P51861 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDR1P51861 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CDR1P51861 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CDR1P51861 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CDR1P51861 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.64■■□□□ 1.53
CDR1P51861 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CDR1P51861 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDR1P51861 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDR1P51861 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDR1P51861 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
CDR1P51861 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDR1P51861 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CDR1P51861 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.63■■□□□ 1.53
CDR1P51861 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDR1P51861 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDR1P51861 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDR1P51861 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.62■■□□□ 1.53
CDR1P51861 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.62■■□□□ 1.53
CDR1P51861 SNX5-217ENST00000606557 1087 ntBASIC24.62■■□□□ 1.53
CDR1P51861 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDR1P51861 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDR1P51861 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CDR1P51861 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.61■■□□□ 1.53
CDR1P51861 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CDR1P51861 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CDR1P51861 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.61■■□□□ 1.53
CDR1P51861 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.61■■□□□ 1.53
CDR1P51861 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.61■■□□□ 1.53
CDR1P51861 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDR1P51861 AC138932.3-201ENST00000567634 1902 ntBASIC24.61■■□□□ 1.53
CDR1P51861 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.6■■□□□ 1.53
CDR1P51861 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDR1P51861 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDR1P51861 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
CDR1P51861 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDR1P51861 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDR1P51861 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDR1P51861 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.6■■□□□ 1.53
CDR1P51861 AL117332.1-201ENST00000622628 974 ntBASIC24.6■■□□□ 1.53
CDR1P51861 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.6■■□□□ 1.53
CDR1P51861 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDR1P51861 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.6■■□□□ 1.53
CDR1P51861 PKD1P6-201ENST00000343738 4769 ntBASIC24.6■■□□□ 1.53
CDR1P51861 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.59■■□□□ 1.53
CDR1P51861 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
CDR1P51861 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDR1P51861 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDR1P51861 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.59■■□□□ 1.53
CDR1P51861 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms