Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
UBE2AP49459 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UBE2AP49459 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2AP49459 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2AP49459 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2AP49459 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2AP49459 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2AP49459 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2AP49459 AC090877.2-201ENST00000558441 1738 ntBASIC14.35□□□□□ -0.11
UBE2AP49459 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2AP49459 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2AP49459 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2AP49459 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBE2AP49459 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBE2AP49459 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
UBE2AP49459 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
UBE2AP49459 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2AP49459 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC14.34□□□□□ -0.11
UBE2AP49459 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
UBE2AP49459 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
UBE2AP49459 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC14.34□□□□□ -0.11
UBE2AP49459 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
UBE2AP49459 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2AP49459 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2AP49459 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
UBE2AP49459 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
UBE2AP49459 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
UBE2AP49459 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2AP49459 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2AP49459 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC14.33□□□□□ -0.11
UBE2AP49459 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
UBE2AP49459 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2AP49459 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2AP49459 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2AP49459 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2AP49459 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2AP49459 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2AP49459 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
UBE2AP49459 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2AP49459 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2AP49459 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2AP49459 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
UBE2AP49459 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC14.32□□□□□ -0.12
UBE2AP49459 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
UBE2AP49459 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
UBE2AP49459 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2AP49459 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2AP49459 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2AP49459 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC14.32□□□□□ -0.12
UBE2AP49459 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2AP49459 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC14.32□□□□□ -0.12
UBE2AP49459 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
UBE2AP49459 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2AP49459 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
UBE2AP49459 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC14.32□□□□□ -0.12
UBE2AP49459 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2AP49459 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2AP49459 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2AP49459 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
UBE2AP49459 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2AP49459 LONRF2P2-201ENST00000439212 571 ntBASIC14.31□□□□□ -0.12
UBE2AP49459 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
UBE2AP49459 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.31□□□□□ -0.12
UBE2AP49459 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2AP49459 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2AP49459 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC14.31□□□□□ -0.12
UBE2AP49459 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2AP49459 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
UBE2AP49459 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC14.31□□□□□ -0.12
UBE2AP49459 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2AP49459 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
UBE2AP49459 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2AP49459 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2AP49459 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2AP49459 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2AP49459 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2AP49459 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2AP49459 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBE2AP49459 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2AP49459 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2AP49459 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2AP49459 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2AP49459 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UBE2AP49459 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2AP49459 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.3□□□□□ -0.12
UBE2AP49459 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2AP49459 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2AP49459 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2AP49459 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2AP49459 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2AP49459 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.29□□□□□ -0.12
UBE2AP49459 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2AP49459 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2AP49459 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2AP49459 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2AP49459 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2AP49459 AC022616.5-201ENST00000518796 181 ntBASIC14.29□□□□□ -0.12
UBE2AP49459 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.29□□□□□ -0.12
UBE2AP49459 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UBE2AP49459 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms