Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD40P25942 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD40P25942 MIR638-201ENST00000385237 100 ntBASIC19.72■□□□□ 0.75
CD40P25942 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.72■□□□□ 0.75
CD40P25942 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.72■□□□□ 0.75
CD40P25942 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.72■□□□□ 0.75
CD40P25942 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CD40P25942 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD40P25942 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CD40P25942 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD40P25942 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD40P25942 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD40P25942 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD40P25942 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.71■□□□□ 0.75
CD40P25942 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CD40P25942 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD40P25942 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.7■□□□□ 0.74
CD40P25942 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD40P25942 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD40P25942 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.7■□□□□ 0.74
CD40P25942 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CD40P25942 ALDH1A3-203ENST00000557963 1670 ntBASIC19.7■□□□□ 0.74
CD40P25942 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD40P25942 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD40P25942 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD40P25942 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD40P25942 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD40P25942 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD40P25942 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.69■□□□□ 0.74
CD40P25942 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CD40P25942 AC009102.2-201ENST00000606772 1639 ntBASIC19.69■□□□□ 0.74
CD40P25942 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CD40P25942 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.68■□□□□ 0.74
CD40P25942 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.68■□□□□ 0.74
CD40P25942 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD40P25942 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.68■□□□□ 0.74
CD40P25942 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD40P25942 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CD40P25942 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CD40P25942 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD40P25942 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CD40P25942 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.67■□□□□ 0.74
CD40P25942 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.67■□□□□ 0.74
CD40P25942 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CD40P25942 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD40P25942 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD40P25942 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CD40P25942 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CD40P25942 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CD40P25942 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD40P25942 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.67■□□□□ 0.74
CD40P25942 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD40P25942 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD40P25942 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD40P25942 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD40P25942 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD40P25942 UNC93B3-201ENST00000308076 687 ntBASIC19.66■□□□□ 0.74
CD40P25942 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CD40P25942 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.66■□□□□ 0.74
CD40P25942 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.66■□□□□ 0.74
CD40P25942 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.66■□□□□ 0.74
CD40P25942 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CD40P25942 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD40P25942 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD40P25942 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD40P25942 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD40P25942 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD40P25942 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.65■□□□□ 0.74
CD40P25942 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD40P25942 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD40P25942 AC092171.4-201ENST00000609130 632 ntBASIC19.65■□□□□ 0.74
CD40P25942 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.65■□□□□ 0.74
CD40P25942 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD40P25942 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.65■□□□□ 0.74
CD40P25942 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.65■□□□□ 0.74
CD40P25942 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD40P25942 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CD40P25942 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CD40P25942 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CD40P25942 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CD40P25942 PBX2P1-201ENST00000493219 1291 ntBASIC19.64■□□□□ 0.73
CD40P25942 DUX4L19-201ENST00000557448 1267 ntBASIC19.64■□□□□ 0.73
CD40P25942 AC133561.4-201ENST00000566112 224 ntBASIC19.64■□□□□ 0.73
CD40P25942 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.64■□□□□ 0.73
CD40P25942 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD40P25942 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CD40P25942 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD40P25942 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CD40P25942 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.63■□□□□ 0.73
CD40P25942 AL136162.1-201ENST00000607711 1078 ntBASIC19.63■□□□□ 0.73
CD40P25942 AC106739.1-201ENST00000617035 715 ntBASIC19.63■□□□□ 0.73
CD40P25942 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CD40P25942 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD40P25942 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD40P25942 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD40P25942 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD40P25942 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
CD40P25942 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD40P25942 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD40P25942 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms