Protein–RNA interactions for Protein: P11277

SPTB, Spectrin beta chain, erythrocytic, humanhuman

Predictions only

Length 2,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBP11277 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPTBP11277 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPTBP11277 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SPTBP11277 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SPTBP11277 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPTBP11277 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SPTBP11277 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPTBP11277 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPTBP11277 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPTBP11277 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.74■■□□□ 1.07
SPTBP11277 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPTBP11277 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.74■■□□□ 1.07
SPTBP11277 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPTBP11277 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.74■■□□□ 1.07
SPTBP11277 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPTBP11277 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPTBP11277 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SPTBP11277 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SPTBP11277 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPTBP11277 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPTBP11277 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.73■■□□□ 1.07
SPTBP11277 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.73■■□□□ 1.07
SPTBP11277 AP003733.4-201ENST00000623785 1697 ntBASIC21.73■■□□□ 1.07
SPTBP11277 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPTBP11277 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPTBP11277 AL139246.5-201ENST00000606645 996 ntBASIC21.72■■□□□ 1.07
SPTBP11277 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPTBP11277 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.72■■□□□ 1.07
SPTBP11277 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPTBP11277 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.71■■□□□ 1.07
SPTBP11277 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.71■■□□□ 1.07
SPTBP11277 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.71■■□□□ 1.07
SPTBP11277 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.71■■□□□ 1.07
SPTBP11277 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SPTBP11277 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.71■■□□□ 1.07
SPTBP11277 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPTBP11277 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPTBP11277 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPTBP11277 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.71■■□□□ 1.07
SPTBP11277 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
SPTBP11277 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SPTBP11277 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SPTBP11277 AC009102.2-201ENST00000606772 1639 ntBASIC21.7■■□□□ 1.06
SPTBP11277 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.7■■□□□ 1.06
SPTBP11277 AC106739.1-201ENST00000617035 715 ntBASIC21.7■■□□□ 1.06
SPTBP11277 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.7■■□□□ 1.06
SPTBP11277 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SPTBP11277 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPTBP11277 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPTBP11277 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SPTBP11277 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPTBP11277 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.7■■□□□ 1.06
SPTBP11277 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SPTBP11277 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.7■■□□□ 1.06
SPTBP11277 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.7■■□□□ 1.06
SPTBP11277 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPTBP11277 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SPTBP11277 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPTBP11277 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPTBP11277 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SPTBP11277 C17orf82-201ENST00000623772 1530 ntBASIC21.69■■□□□ 1.06
SPTBP11277 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPTBP11277 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.69■■□□□ 1.06
SPTBP11277 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SPTBP11277 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPTBP11277 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.68■■□□□ 1.06
SPTBP11277 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.68■■□□□ 1.06
SPTBP11277 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPTBP11277 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPTBP11277 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.67■■□□□ 1.06
SPTBP11277 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPTBP11277 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTBP11277 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.66■■□□□ 1.06
SPTBP11277 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTBP11277 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTBP11277 AC024257.2-201ENST00000549699 147 ntBASIC21.66■■□□□ 1.06
SPTBP11277 AL031432.3-201ENST00000607698 485 ntBASIC21.66■■□□□ 1.06
SPTBP11277 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTBP11277 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTBP11277 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTBP11277 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SPTBP11277 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTBP11277 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTBP11277 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.65■■□□□ 1.06
SPTBP11277 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.65■■□□□ 1.06
SPTBP11277 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTBP11277 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.65■■□□□ 1.06
SPTBP11277 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTBP11277 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.65■■□□□ 1.06
SPTBP11277 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTBP11277 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SPTBP11277 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SPTBP11277 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPTBP11277 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.64■■□□□ 1.06
SPTBP11277 AC005837.3-201ENST00000612163 286 ntBASIC21.64■■□□□ 1.06
SPTBP11277 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTBP11277 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTBP11277 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SPTBP11277 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.64■■□□□ 1.05
SPTBP11277 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms