Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 C9orf163-202ENST00000624034 2573 ntBASIC20.2■□□□□ 0.82
SPARCP09486 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.2■□□□□ 0.82
SPARCP09486 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPARCP09486 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPARCP09486 ATP5G2P3-201ENST00000429083 425 ntBASIC20.19■□□□□ 0.82
SPARCP09486 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.19■□□□□ 0.82
SPARCP09486 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SPARCP09486 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPARCP09486 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.19■□□□□ 0.82
SPARCP09486 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SPARCP09486 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPARCP09486 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPARCP09486 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPARCP09486 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPARCP09486 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPARCP09486 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.18■□□□□ 0.82
SPARCP09486 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPARCP09486 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPARCP09486 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPARCP09486 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.18■□□□□ 0.82
SPARCP09486 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPARCP09486 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SPARCP09486 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPARCP09486 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPARCP09486 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPARCP09486 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPARCP09486 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SPARCP09486 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SPARCP09486 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.17■□□□□ 0.82
SPARCP09486 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SPARCP09486 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.17■□□□□ 0.82
SPARCP09486 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.17■□□□□ 0.82
SPARCP09486 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SPARCP09486 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPARCP09486 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SPARCP09486 ANOS2P-203ENST00000472227 1816 ntBASIC20.17■□□□□ 0.82
SPARCP09486 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPARCP09486 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPARCP09486 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPARCP09486 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPARCP09486 AC131274.2-201ENST00000580697 1507 ntBASIC20.17■□□□□ 0.82
SPARCP09486 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPARCP09486 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPARCP09486 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPARCP09486 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
SPARCP09486 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPARCP09486 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.16■□□□□ 0.82
SPARCP09486 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.16■□□□□ 0.82
SPARCP09486 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPARCP09486 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SPARCP09486 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.16■□□□□ 0.82
SPARCP09486 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPARCP09486 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPARCP09486 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.16■□□□□ 0.82
SPARCP09486 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPARCP09486 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPARCP09486 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPARCP09486 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPARCP09486 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPARCP09486 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPARCP09486 AC120024.1-201ENST00000562672 995 ntBASIC20.15■□□□□ 0.82
SPARCP09486 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
SPARCP09486 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPARCP09486 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPARCP09486 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPARCP09486 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SPARCP09486 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPARCP09486 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.14■□□□□ 0.81
SPARCP09486 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPARCP09486 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPARCP09486 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPARCP09486 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.14■□□□□ 0.81
SPARCP09486 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPARCP09486 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPARCP09486 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPARCP09486 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SPARCP09486 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPARCP09486 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPARCP09486 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.13■□□□□ 0.81
SPARCP09486 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SPARCP09486 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPARCP09486 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPARCP09486 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPARCP09486 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.13■□□□□ 0.81
SPARCP09486 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPARCP09486 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SPARCP09486 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPARCP09486 TSPY13P-201ENST00000338964 914 ntBASIC20.13■□□□□ 0.81
SPARCP09486 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.13■□□□□ 0.81
SPARCP09486 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPARCP09486 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.13■□□□□ 0.81
SPARCP09486 AC010980.1-201ENST00000587192 1142 ntBASIC20.13■□□□□ 0.81
SPARCP09486 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SPARCP09486 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPARCP09486 AC074183.2-201ENST00000623112 922 ntBASIC20.13■□□□□ 0.81
SPARCP09486 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPARCP09486 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPARCP09486 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPARCP09486 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.12■□□□□ 0.81
SPARCP09486 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms