Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPB1P04440 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DPB1P04440 PKD1P6-201ENST00000343738 4769 ntBASIC20.38■□□□□ 0.85
HLA-DPB1P04440 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DPB1P04440 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DPB1P04440 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DPB1P04440 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DPB1P04440 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DPB1P04440 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DPB1P04440 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DPB1P04440 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPB1P04440 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DPB1P04440 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DPB1P04440 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DPB1P04440 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HLA-DPB1P04440 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DPB1P04440 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DPB1P04440 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.36■□□□□ 0.85
HLA-DPB1P04440 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DPB1P04440 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DPB1P04440 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DPB1P04440 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.36■□□□□ 0.85
HLA-DPB1P04440 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.35■□□□□ 0.85
HLA-DPB1P04440 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HLA-DPB1P04440 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DPB1P04440 DUX4L18-201ENST00000553347 1267 ntBASIC20.35■□□□□ 0.85
HLA-DPB1P04440 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DPB1P04440 MIR6765-201ENST00000614092 87 ntBASIC20.35■□□□□ 0.85
HLA-DPB1P04440 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DPB1P04440 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DPB1P04440 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DPB1P04440 ANOS2P-203ENST00000472227 1816 ntBASIC20.34■□□□□ 0.85
HLA-DPB1P04440 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DPB1P04440 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DPB1P04440 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DPB1P04440 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.34■□□□□ 0.85
HLA-DPB1P04440 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.34■□□□□ 0.85
HLA-DPB1P04440 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.34■□□□□ 0.85
HLA-DPB1P04440 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HLA-DPB1P04440 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.34■□□□□ 0.85
HLA-DPB1P04440 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DPB1P04440 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DPB1P04440 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.33■□□□□ 0.85
HLA-DPB1P04440 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DPB1P04440 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DPB1P04440 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
HLA-DPB1P04440 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
HLA-DPB1P04440 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DPB1P04440 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DPB1P04440 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.33■□□□□ 0.85
HLA-DPB1P04440 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DPB1P04440 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.33■□□□□ 0.84
HLA-DPB1P04440 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
HLA-DPB1P04440 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DPB1P04440 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.32■□□□□ 0.84
HLA-DPB1P04440 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DPB1P04440 DUSP8P3-201ENST00000399571 1760 ntBASIC20.32■□□□□ 0.84
HLA-DPB1P04440 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DPB1P04440 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DPB1P04440 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HLA-DPB1P04440 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DPB1P04440 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
HLA-DPB1P04440 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-DPB1P04440 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HLA-DPB1P04440 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DPB1P04440 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DPB1P04440 AC092068.2-201ENST00000590491 1708 ntBASIC20.31■□□□□ 0.84
HLA-DPB1P04440 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DPB1P04440 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DPB1P04440 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DPB1P04440 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DPB1P04440 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HLA-DPB1P04440 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HLA-DPB1P04440 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DPB1P04440 FOXO3B-201ENST00000395675 1928 ntBASIC20.3■□□□□ 0.84
HLA-DPB1P04440 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.3■□□□□ 0.84
HLA-DPB1P04440 AC004987.1-201ENST00000428627 508 ntBASIC20.3■□□□□ 0.84
HLA-DPB1P04440 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DPB1P04440 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DPB1P04440 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DPB1P04440 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DPB1P04440 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DPB1P04440 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DPB1P04440 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
HLA-DPB1P04440 C1orf229-201ENST00000623686 2258 ntBASIC20.29■□□□□ 0.84
HLA-DPB1P04440 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms