Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP1O94782 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.01■■□□□ 1.27
USP1O94782 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.01■■□□□ 1.27
USP1O94782 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.01■■□□□ 1.27
USP1O94782 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP1O94782 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
USP1O94782 AC120024.1-201ENST00000562672 995 ntBASIC23■■□□□ 1.27
USP1O94782 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP1O94782 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
USP1O94782 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP1O94782 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.99■■□□□ 1.27
USP1O94782 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP1O94782 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP1O94782 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP1O94782 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
USP1O94782 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.99■■□□□ 1.27
USP1O94782 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
USP1O94782 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.99■■□□□ 1.27
USP1O94782 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
USP1O94782 PVT1_1.1-201ENST00000615125 194 ntBASIC22.99■■□□□ 1.27
USP1O94782 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
USP1O94782 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.99■■□□□ 1.27
USP1O94782 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.98■■□□□ 1.27
USP1O94782 AC079834.2-201ENST00000609776 1949 ntBASIC22.98■■□□□ 1.27
USP1O94782 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
USP1O94782 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
USP1O94782 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
USP1O94782 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
USP1O94782 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
USP1O94782 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
USP1O94782 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.97■■□□□ 1.27
USP1O94782 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.97■■□□□ 1.27
USP1O94782 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.97■■□□□ 1.27
USP1O94782 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
USP1O94782 CLDN5-201ENST00000403084 2357 ntBASIC22.97■■□□□ 1.27
USP1O94782 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
USP1O94782 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.97■■□□□ 1.27
USP1O94782 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
USP1O94782 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
USP1O94782 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
USP1O94782 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.96■■□□□ 1.27
USP1O94782 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
USP1O94782 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.96■■□□□ 1.27
USP1O94782 KRT18P24-201ENST00000344739 1156 ntBASIC22.96■■□□□ 1.27
USP1O94782 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.96■■□□□ 1.27
USP1O94782 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.96■■□□□ 1.27
USP1O94782 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
USP1O94782 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
USP1O94782 ANOS2P-203ENST00000472227 1816 ntBASIC22.96■■□□□ 1.27
USP1O94782 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
USP1O94782 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
USP1O94782 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.95■■□□□ 1.26
USP1O94782 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.95■■□□□ 1.26
USP1O94782 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.95■■□□□ 1.26
USP1O94782 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
USP1O94782 AC010980.1-201ENST00000587192 1142 ntBASIC22.95■■□□□ 1.26
USP1O94782 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.94■■□□□ 1.26
USP1O94782 ALDH1A3-203ENST00000557963 1670 ntBASIC22.94■■□□□ 1.26
USP1O94782 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
USP1O94782 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
USP1O94782 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.94■■□□□ 1.26
USP1O94782 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.94■■□□□ 1.26
USP1O94782 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.94■■□□□ 1.26
USP1O94782 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.94■■□□□ 1.26
USP1O94782 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
USP1O94782 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
USP1O94782 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.94■■□□□ 1.26
USP1O94782 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
USP1O94782 AC092068.2-201ENST00000590491 1708 ntBASIC22.94■■□□□ 1.26
USP1O94782 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.93■■□□□ 1.26
USP1O94782 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
USP1O94782 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
USP1O94782 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.93■■□□□ 1.26
USP1O94782 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.93■■□□□ 1.26
USP1O94782 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
USP1O94782 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.93■■□□□ 1.26
USP1O94782 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.93■■□□□ 1.26
USP1O94782 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
USP1O94782 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.93■■□□□ 1.26
USP1O94782 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
USP1O94782 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.93■■□□□ 1.26
USP1O94782 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
USP1O94782 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
USP1O94782 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
USP1O94782 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
USP1O94782 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
USP1O94782 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
USP1O94782 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
USP1O94782 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.92■■□□□ 1.26
USP1O94782 MIR4281-201ENST00000580852 62 ntBASIC22.92■■□□□ 1.26
USP1O94782 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.92■■□□□ 1.26
USP1O94782 THA1P-201ENST00000590384 1145 ntBASIC22.92■■□□□ 1.26
USP1O94782 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
USP1O94782 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
USP1O94782 AF131216.4-201ENST00000638924 1588 ntBASIC22.92■■□□□ 1.26
USP1O94782 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
USP1O94782 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
USP1O94782 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
USP1O94782 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
USP1O94782 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms