Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SSX5O60225 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX5O60225 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SSX5O60225 AC007029.1-201ENST00000604183 313 ntBASIC19.42■□□□□ 0.7
SSX5O60225 RAP2CP1-202ENST00000605179 643 ntBASIC19.42■□□□□ 0.7
SSX5O60225 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX5O60225 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.42■□□□□ 0.7
SSX5O60225 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX5O60225 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SSX5O60225 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.42■□□□□ 0.7
SSX5O60225 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX5O60225 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.41■□□□□ 0.7
SSX5O60225 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSX5O60225 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX5O60225 PKD1P6-201ENST00000343738 4769 ntBASIC19.41■□□□□ 0.7
SSX5O60225 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
SSX5O60225 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSX5O60225 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.41■□□□□ 0.7
SSX5O60225 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SSX5O60225 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.41■□□□□ 0.7
SSX5O60225 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX5O60225 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SSX5O60225 DUSP8P3-201ENST00000399571 1760 ntBASIC19.41■□□□□ 0.7
SSX5O60225 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSX5O60225 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.41■□□□□ 0.7
SSX5O60225 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SSX5O60225 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SSX5O60225 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX5O60225 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX5O60225 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SSX5O60225 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX5O60225 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX5O60225 KRT18P10-201ENST00000388836 1287 ntBASIC19.4■□□□□ 0.7
SSX5O60225 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX5O60225 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX5O60225 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX5O60225 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX5O60225 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX5O60225 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX5O60225 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SSX5O60225 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX5O60225 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SSX5O60225 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SSX5O60225 AC092068.2-201ENST00000590491 1708 ntBASIC19.39■□□□□ 0.7
SSX5O60225 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSX5O60225 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX5O60225 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX5O60225 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.39■□□□□ 0.69
SSX5O60225 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.39■□□□□ 0.69
SSX5O60225 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.39■□□□□ 0.69
SSX5O60225 AC026202.3-201ENST00000600805 1127 ntBASIC19.39■□□□□ 0.69
SSX5O60225 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSX5O60225 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX5O60225 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSX5O60225 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX5O60225 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.39■□□□□ 0.69
SSX5O60225 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSX5O60225 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX5O60225 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SSX5O60225 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX5O60225 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX5O60225 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.38■□□□□ 0.69
SSX5O60225 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.38■□□□□ 0.69
SSX5O60225 C1orf229-201ENST00000623686 2258 ntBASIC19.38■□□□□ 0.69
SSX5O60225 AC022413.1-201ENST00000624602 984 ntBASIC19.38■□□□□ 0.69
SSX5O60225 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX5O60225 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSX5O60225 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX5O60225 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX5O60225 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX5O60225 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX5O60225 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.37■□□□□ 0.69
SSX5O60225 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX5O60225 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.37■□□□□ 0.69
SSX5O60225 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX5O60225 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX5O60225 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX5O60225 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SSX5O60225 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX5O60225 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX5O60225 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SSX5O60225 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX5O60225 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX5O60225 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SSX5O60225 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX5O60225 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSX5O60225 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSX5O60225 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSX5O60225 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSX5O60225 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSX5O60225 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX5O60225 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSX5O60225 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX5O60225 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.35■□□□□ 0.69
SSX5O60225 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.35■□□□□ 0.69
SSX5O60225 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX5O60225 LINC00565-201ENST00000562710 2331 ntBASIC19.35■□□□□ 0.69
SSX5O60225 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSX5O60225 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.34■□□□□ 0.69
SSX5O60225 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms