Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6DO43924 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PDE6DO43924 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6DO43924 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6DO43924 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6DO43924 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.65■□□□□ 0.42
PDE6DO43924 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.65■□□□□ 0.42
PDE6DO43924 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PDE6DO43924 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6DO43924 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.65■□□□□ 0.42
PDE6DO43924 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.65■□□□□ 0.42
PDE6DO43924 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6DO43924 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6DO43924 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6DO43924 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6DO43924 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6DO43924 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6DO43924 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6DO43924 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6DO43924 AC126177.7-201ENST00000547904 679 ntBASIC17.64■□□□□ 0.41
PDE6DO43924 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6DO43924 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.64■□□□□ 0.41
PDE6DO43924 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6DO43924 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6DO43924 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6DO43924 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6DO43924 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6DO43924 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6DO43924 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6DO43924 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6DO43924 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.63■□□□□ 0.41
PDE6DO43924 AC021231.2-201ENST00000594613 730 ntBASIC17.63■□□□□ 0.41
PDE6DO43924 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.63■□□□□ 0.41
PDE6DO43924 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
PDE6DO43924 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PDE6DO43924 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6DO43924 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6DO43924 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6DO43924 ESRRAP2-201ENST00000418437 1549 ntBASIC17.62■□□□□ 0.41
PDE6DO43924 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6DO43924 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PDE6DO43924 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.62■□□□□ 0.41
PDE6DO43924 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6DO43924 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.62■□□□□ 0.41
PDE6DO43924 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6DO43924 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6DO43924 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6DO43924 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6DO43924 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.62■□□□□ 0.41
PDE6DO43924 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PDE6DO43924 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6DO43924 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.62■□□□□ 0.41
PDE6DO43924 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6DO43924 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6DO43924 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PDE6DO43924 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6DO43924 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6DO43924 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PDE6DO43924 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6DO43924 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.61■□□□□ 0.41
PDE6DO43924 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PDE6DO43924 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6DO43924 AP006261.1-201ENST00000584783 668 ntBASIC17.61■□□□□ 0.41
PDE6DO43924 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6DO43924 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PDE6DO43924 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PDE6DO43924 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6DO43924 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.6■□□□□ 0.41
PDE6DO43924 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6DO43924 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6DO43924 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6DO43924 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6DO43924 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6DO43924 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6DO43924 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.6■□□□□ 0.41
PDE6DO43924 AC044849.2-201ENST00000606596 710 ntBASIC17.6■□□□□ 0.41
PDE6DO43924 AC087741.3-201ENST00000624270 1347 ntBASIC17.6■□□□□ 0.41
PDE6DO43924 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6DO43924 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6DO43924 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6DO43924 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.6■□□□□ 0.41
PDE6DO43924 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6DO43924 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.6■□□□□ 0.41
PDE6DO43924 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PDE6DO43924 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6DO43924 AL137060.1-201ENST00000618151 2648 ntBASIC17.59■□□□□ 0.41
PDE6DO43924 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PDE6DO43924 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6DO43924 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6DO43924 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6DO43924 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6DO43924 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.59■□□□□ 0.41
PDE6DO43924 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6DO43924 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6DO43924 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6DO43924 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6DO43924 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6DO43924 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6DO43924 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6DO43924 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms