Protein–RNA interactions for Protein: O43272

PRODH, Proline dehydrogenase 1, mitochondrial, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRODHO43272 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRODHO43272 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRODHO43272 AL161729.1-201ENST00000604104 1402 ntBASIC20.61■□□□□ 0.89
PRODHO43272 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.61■□□□□ 0.89
PRODHO43272 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.6■□□□□ 0.89
PRODHO43272 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRODHO43272 RPS2P7-201ENST00000447334 885 ntBASIC20.6■□□□□ 0.89
PRODHO43272 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PRODHO43272 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PRODHO43272 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRODHO43272 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRODHO43272 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRODHO43272 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PRODHO43272 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.59■□□□□ 0.89
PRODHO43272 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRODHO43272 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRODHO43272 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRODHO43272 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRODHO43272 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRODHO43272 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRODHO43272 AC090877.2-201ENST00000558441 1738 ntBASIC20.58■□□□□ 0.89
PRODHO43272 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRODHO43272 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRODHO43272 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PRODHO43272 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PRODHO43272 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PRODHO43272 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRODHO43272 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.58■□□□□ 0.88
PRODHO43272 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
PRODHO43272 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRODHO43272 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PRODHO43272 EP400NL-214ENST00000641289 2402 ntBASIC20.57■□□□□ 0.88
PRODHO43272 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRODHO43272 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRODHO43272 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRODHO43272 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRODHO43272 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.57■□□□□ 0.88
PRODHO43272 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.57■□□□□ 0.88
PRODHO43272 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PRODHO43272 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.57■□□□□ 0.88
PRODHO43272 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRODHO43272 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PRODHO43272 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRODHO43272 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRODHO43272 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRODHO43272 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.56■□□□□ 0.88
PRODHO43272 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRODHO43272 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRODHO43272 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRODHO43272 AC018755.3-202ENST00000596210 929 ntBASIC20.56■□□□□ 0.88
PRODHO43272 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PRODHO43272 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRODHO43272 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PRODHO43272 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRODHO43272 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRODHO43272 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRODHO43272 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
PRODHO43272 C1orf229-201ENST00000623686 2258 ntBASIC20.56■□□□□ 0.88
PRODHO43272 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRODHO43272 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRODHO43272 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRODHO43272 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.55■□□□□ 0.88
PRODHO43272 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PRODHO43272 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.55■□□□□ 0.88
PRODHO43272 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.55■□□□□ 0.88
PRODHO43272 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PRODHO43272 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRODHO43272 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRODHO43272 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PRODHO43272 RNF126P1-201ENST00000567452 1320 ntBASIC20.54■□□□□ 0.88
PRODHO43272 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.54■□□□□ 0.88
PRODHO43272 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PRODHO43272 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRODHO43272 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.54■□□□□ 0.88
PRODHO43272 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRODHO43272 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRODHO43272 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PRODHO43272 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PRODHO43272 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRODHO43272 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRODHO43272 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.54■□□□□ 0.88
PRODHO43272 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
PRODHO43272 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRODHO43272 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PRODHO43272 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRODHO43272 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
PRODHO43272 AL592295.1-201ENST00000400984 884 ntBASIC20.53■□□□□ 0.88
PRODHO43272 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.53■□□□□ 0.88
PRODHO43272 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRODHO43272 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.53■□□□□ 0.88
PRODHO43272 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRODHO43272 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PRODHO43272 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRODHO43272 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRODHO43272 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.53■□□□□ 0.88
PRODHO43272 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRODHO43272 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRODHO43272 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRODHO43272 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRODHO43272 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms