Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.93■□□□□ 0.62
TSPAN4O14817 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN4O14817 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN4O14817 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN4O14817 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN4O14817 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TSPAN4O14817 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN4O14817 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TSPAN4O14817 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN4O14817 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TSPAN4O14817 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN4O14817 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN4O14817 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN4O14817 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.92■□□□□ 0.62
TSPAN4O14817 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.92■□□□□ 0.62
TSPAN4O14817 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN4O14817 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN4O14817 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TSPAN4O14817 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TSPAN4O14817 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.91■□□□□ 0.62
TSPAN4O14817 MIR4449-201ENST00000578365 66 ntBASIC18.91■□□□□ 0.62
TSPAN4O14817 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
TSPAN4O14817 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TSPAN4O14817 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN4O14817 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN4O14817 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.91■□□□□ 0.62
TSPAN4O14817 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN4O14817 AC127496.7-201ENST00000625110 1798 ntBASIC18.91■□□□□ 0.62
TSPAN4O14817 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN4O14817 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN4O14817 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN4O14817 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TSPAN4O14817 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN4O14817 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
TSPAN4O14817 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN4O14817 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN4O14817 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN4O14817 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN4O14817 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN4O14817 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.9■□□□□ 0.62
TSPAN4O14817 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TSPAN4O14817 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN4O14817 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN4O14817 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TSPAN4O14817 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN4O14817 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
TSPAN4O14817 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN4O14817 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TSPAN4O14817 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.89■□□□□ 0.61
TSPAN4O14817 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.89■□□□□ 0.61
TSPAN4O14817 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN4O14817 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TSPAN4O14817 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.89■□□□□ 0.61
TSPAN4O14817 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.89■□□□□ 0.61
TSPAN4O14817 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN4O14817 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.88■□□□□ 0.61
TSPAN4O14817 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN4O14817 LINC00526-201ENST00000581067 1875 ntBASIC18.88■□□□□ 0.61
TSPAN4O14817 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN4O14817 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN4O14817 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN4O14817 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TSPAN4O14817 MIR219A2-201ENST00000608502 1504 ntBASIC18.88■□□□□ 0.61
TSPAN4O14817 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN4O14817 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.88■□□□□ 0.61
TSPAN4O14817 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN4O14817 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN4O14817 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TSPAN4O14817 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TSPAN4O14817 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN4O14817 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN4O14817 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN4O14817 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN4O14817 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.87■□□□□ 0.61
TSPAN4O14817 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.87■□□□□ 0.61
TSPAN4O14817 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
TSPAN4O14817 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN4O14817 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN4O14817 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN4O14817 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TSPAN4O14817 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN4O14817 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
TSPAN4O14817 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.86■□□□□ 0.61
TSPAN4O14817 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TSPAN4O14817 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN4O14817 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN4O14817 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.86■□□□□ 0.61
TSPAN4O14817 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN4O14817 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN4O14817 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN4O14817 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN4O14817 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN4O14817 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.86■□□□□ 0.61
TSPAN4O14817 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN4O14817 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN4O14817 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN4O14817 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN4O14817 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN4O14817 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
TSPAN4O14817 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms