Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
CHD2O14647 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC32.34■■■□□ 2.77
CHD2O14647 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
CHD2O14647 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC32.34■■■□□ 2.77
CHD2O14647 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CHD2O14647 AC142086.6-201ENST00000621154 1765 ntBASIC32.34■■■□□ 2.77
CHD2O14647 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
CHD2O14647 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CHD2O14647 KRT18P14-201ENST00000534205 1250 ntBASIC32.33■■■□□ 2.77
CHD2O14647 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CHD2O14647 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC32.33■■■□□ 2.77
CHD2O14647 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC32.33■■■□□ 2.77
CHD2O14647 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CHD2O14647 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC32.33■■■□□ 2.77
CHD2O14647 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
CHD2O14647 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC32.33■■■□□ 2.77
CHD2O14647 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
CHD2O14647 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC32.32■■■□□ 2.76
CHD2O14647 IGHV3-19-201ENST00000521488 291 ntBASIC32.32■■■□□ 2.76
CHD2O14647 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CHD2O14647 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CHD2O14647 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
CHD2O14647 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC32.32■■■□□ 2.76
CHD2O14647 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC32.31■■■□□ 2.76
CHD2O14647 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC32.31■■■□□ 2.76
CHD2O14647 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC32.31■■■□□ 2.76
CHD2O14647 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CHD2O14647 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CHD2O14647 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CHD2O14647 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CHD2O14647 VGF-203ENST00000611537 1622 ntTSL 5 BASIC32.3■■■□□ 2.76
CHD2O14647 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC32.3■■■□□ 2.76
CHD2O14647 MIR572-201ENST00000384983 95 ntBASIC32.3■■■□□ 2.76
CHD2O14647 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC32.3■■■□□ 2.76
CHD2O14647 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC32.3■■■□□ 2.76
CHD2O14647 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CHD2O14647 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
CHD2O14647 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
CHD2O14647 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
CHD2O14647 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC32.29■■■□□ 2.76
CHD2O14647 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC32.28■■■□□ 2.76
CHD2O14647 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC32.28■■■□□ 2.76
CHD2O14647 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
CHD2O14647 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CHD2O14647 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC32.28■■■□□ 2.76
CHD2O14647 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
CHD2O14647 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
CHD2O14647 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC32.28■■■□□ 2.76
CHD2O14647 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC32.28■■■□□ 2.76
CHD2O14647 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CHD2O14647 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC32.28■■■□□ 2.76
CHD2O14647 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
CHD2O14647 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CHD2O14647 GTSE1-AS1-202ENST00000623117 1518 ntBASIC32.27■■■□□ 2.76
CHD2O14647 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC32.27■■■□□ 2.76
CHD2O14647 HLA-L-209ENST00000420110 1011 ntBASIC32.27■■■□□ 2.76
CHD2O14647 TERF1P2-201ENST00000583350 1212 ntBASIC32.27■■■□□ 2.76
CHD2O14647 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC32.27■■■□□ 2.76
CHD2O14647 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC32.26■■■□□ 2.76
CHD2O14647 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
CHD2O14647 MIR6084-201ENST00000622012 110 ntBASIC32.26■■■□□ 2.76
CHD2O14647 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC32.26■■■□□ 2.75
CHD2O14647 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
CHD2O14647 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
CHD2O14647 NME4-202ENST00000382940 766 ntTSL 3 BASIC32.26■■■□□ 2.75
CHD2O14647 MIR6089-201ENST00000616698 64 ntBASIC32.26■■■□□ 2.75
CHD2O14647 NME4-211ENST00000620944 1193 ntTSL 2 BASIC32.26■■■□□ 2.75
CHD2O14647 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CHD2O14647 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
CHD2O14647 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
CHD2O14647 AL354811.1-201ENST00000610286 706 ntBASIC32.25■■■□□ 2.75
CHD2O14647 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC32.25■■■□□ 2.75
CHD2O14647 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
CHD2O14647 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC32.24■■■□□ 2.75
CHD2O14647 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC32.24■■■□□ 2.75
CHD2O14647 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC32.24■■■□□ 2.75
CHD2O14647 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
CHD2O14647 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CHD2O14647 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHD2O14647 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHD2O14647 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC32.23■■■□□ 2.75
CHD2O14647 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CHD2O14647 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHD2O14647 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
CHD2O14647 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC32.23■■■□□ 2.75
CHD2O14647 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
CHD2O14647 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CHD2O14647 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC32.22■■■□□ 2.75
CHD2O14647 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC32.22■■■□□ 2.75
CHD2O14647 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CHD2O14647 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CHD2O14647 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC32.21■■■□□ 2.75
CHD2O14647 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC32.21■■■□□ 2.75
CHD2O14647 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC32.21■■■□□ 2.75
CHD2O14647 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CHD2O14647 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.75
CHD2O14647 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CHD2O14647 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
CHD2O14647 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CHD2O14647 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms