Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRAFD1O14545 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAFD1O14545 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.31■■□□□ 1.32
TRAFD1O14545 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAFD1O14545 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.31■■□□□ 1.32
TRAFD1O14545 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAFD1O14545 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRAFD1O14545 AC131274.2-201ENST00000580697 1507 ntBASIC23.3■■□□□ 1.32
TRAFD1O14545 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRAFD1O14545 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.3■■□□□ 1.32
TRAFD1O14545 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.3■■□□□ 1.32
TRAFD1O14545 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRAFD1O14545 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRAFD1O14545 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.29■■□□□ 1.32
TRAFD1O14545 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.29■■□□□ 1.32
TRAFD1O14545 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRAFD1O14545 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TRAFD1O14545 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAFD1O14545 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAFD1O14545 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
TRAFD1O14545 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAFD1O14545 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRAFD1O14545 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAFD1O14545 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
TRAFD1O14545 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.28■■□□□ 1.32
TRAFD1O14545 UNC93B8-201ENST00000511903 705 ntBASIC23.28■■□□□ 1.32
TRAFD1O14545 SNX5-217ENST00000606557 1087 ntBASIC23.28■■□□□ 1.32
TRAFD1O14545 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.28■■□□□ 1.32
TRAFD1O14545 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAFD1O14545 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.28■■□□□ 1.32
TRAFD1O14545 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAFD1O14545 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAFD1O14545 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAFD1O14545 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRAFD1O14545 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRAFD1O14545 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRAFD1O14545 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRAFD1O14545 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRAFD1O14545 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRAFD1O14545 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRAFD1O14545 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRAFD1O14545 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.27■■□□□ 1.32
TRAFD1O14545 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRAFD1O14545 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRAFD1O14545 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRAFD1O14545 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.26■■□□□ 1.31
TRAFD1O14545 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.26■■□□□ 1.31
TRAFD1O14545 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.26■■□□□ 1.31
TRAFD1O14545 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRAFD1O14545 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
TRAFD1O14545 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.26■■□□□ 1.31
TRAFD1O14545 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.26■■□□□ 1.31
TRAFD1O14545 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.26■■□□□ 1.31
TRAFD1O14545 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.25■■□□□ 1.31
TRAFD1O14545 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRAFD1O14545 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRAFD1O14545 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
TRAFD1O14545 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRAFD1O14545 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TRAFD1O14545 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRAFD1O14545 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.25■■□□□ 1.31
TRAFD1O14545 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRAFD1O14545 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.25■■□□□ 1.31
TRAFD1O14545 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.25■■□□□ 1.31
TRAFD1O14545 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.25■■□□□ 1.31
TRAFD1O14545 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.25■■□□□ 1.31
TRAFD1O14545 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
TRAFD1O14545 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.25■■□□□ 1.31
TRAFD1O14545 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.25■■□□□ 1.31
TRAFD1O14545 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.25■■□□□ 1.31
TRAFD1O14545 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRAFD1O14545 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRAFD1O14545 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
TRAFD1O14545 AC004448.1-201ENST00000458332 883 ntBASIC23.24■■□□□ 1.31
TRAFD1O14545 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.24■■□□□ 1.31
TRAFD1O14545 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.24■■□□□ 1.31
TRAFD1O14545 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRAFD1O14545 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRAFD1O14545 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRAFD1O14545 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRAFD1O14545 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.24■■□□□ 1.31
TRAFD1O14545 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRAFD1O14545 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRAFD1O14545 AC141586.4-201ENST00000624558 1573 ntBASIC23.23■■□□□ 1.31
TRAFD1O14545 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRAFD1O14545 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
TRAFD1O14545 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRAFD1O14545 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.23■■□□□ 1.31
TRAFD1O14545 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRAFD1O14545 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRAFD1O14545 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
TRAFD1O14545 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TRAFD1O14545 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.23■■□□□ 1.31
TRAFD1O14545 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRAFD1O14545 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRAFD1O14545 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
TRAFD1O14545 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRAFD1O14545 TSPY9P-201ENST00000440215 945 ntBASIC23.22■■□□□ 1.31
TRAFD1O14545 TSPY11P-201ENST00000442607 1045 ntBASIC23.22■■□□□ 1.31
TRAFD1O14545 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms