Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.91■■□□□ 1.1
SLC28A1O00337 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC28A1O00337 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.91■■□□□ 1.1
SLC28A1O00337 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SLC28A1O00337 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SLC28A1O00337 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SLC28A1O00337 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC28A1O00337 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC28A1O00337 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.91■■□□□ 1.1
SLC28A1O00337 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.91■■□□□ 1.1
SLC28A1O00337 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.91■■□□□ 1.1
SLC28A1O00337 AC120024.1-201ENST00000562672 995 ntBASIC21.91■■□□□ 1.1
SLC28A1O00337 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.91■■□□□ 1.1
SLC28A1O00337 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC28A1O00337 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SLC28A1O00337 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SLC28A1O00337 ATP5G2P3-201ENST00000429083 425 ntBASIC21.9■■□□□ 1.1
SLC28A1O00337 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.9■■□□□ 1.1
SLC28A1O00337 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SLC28A1O00337 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC28A1O00337 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SLC28A1O00337 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SLC28A1O00337 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SLC28A1O00337 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SLC28A1O00337 C9orf163-202ENST00000624034 2573 ntBASIC21.89■■□□□ 1.09
SLC28A1O00337 AC004987.1-201ENST00000428627 508 ntBASIC21.89■■□□□ 1.09
SLC28A1O00337 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.89■■□□□ 1.09
SLC28A1O00337 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SLC28A1O00337 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC28A1O00337 DUSP8P3-201ENST00000399571 1760 ntBASIC21.89■■□□□ 1.09
SLC28A1O00337 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC28A1O00337 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SLC28A1O00337 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC28A1O00337 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC28A1O00337 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SLC28A1O00337 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.88■■□□□ 1.09
SLC28A1O00337 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC28A1O00337 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC28A1O00337 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SLC28A1O00337 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC28A1O00337 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC28A1O00337 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC28A1O00337 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SLC28A1O00337 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC28A1O00337 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC28A1O00337 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SLC28A1O00337 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.87■■□□□ 1.09
SLC28A1O00337 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.87■■□□□ 1.09
SLC28A1O00337 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC28A1O00337 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC28A1O00337 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC28A1O00337 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC28A1O00337 KRT18P24-201ENST00000344739 1156 ntBASIC21.87■■□□□ 1.09
SLC28A1O00337 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC28A1O00337 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC28A1O00337 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SLC28A1O00337 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC28A1O00337 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.87■■□□□ 1.09
SLC28A1O00337 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.86■■□□□ 1.09
SLC28A1O00337 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SLC28A1O00337 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC28A1O00337 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SLC28A1O00337 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC28A1O00337 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.86■■□□□ 1.09
SLC28A1O00337 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC28A1O00337 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC28A1O00337 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC28A1O00337 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.86■■□□□ 1.09
SLC28A1O00337 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
SLC28A1O00337 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC28A1O00337 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC28A1O00337 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC28A1O00337 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC28A1O00337 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC28A1O00337 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC28A1O00337 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC28A1O00337 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SLC28A1O00337 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC28A1O00337 THA1P-201ENST00000590384 1145 ntBASIC21.85■■□□□ 1.09
SLC28A1O00337 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.85■■□□□ 1.09
SLC28A1O00337 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SLC28A1O00337 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC28A1O00337 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC28A1O00337 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.84■■□□□ 1.09
SLC28A1O00337 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.84■■□□□ 1.09
SLC28A1O00337 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC28A1O00337 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC28A1O00337 PVT1_1.1-201ENST00000615125 194 ntBASIC21.84■■□□□ 1.09
SLC28A1O00337 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC28A1O00337 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC28A1O00337 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC28A1O00337 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.84■■□□□ 1.09
SLC28A1O00337 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SLC28A1O00337 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SLC28A1O00337 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC28A1O00337 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SLC28A1O00337 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.83■■□□□ 1.09
SLC28A1O00337 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC28A1O00337 TSPY13P-201ENST00000338964 914 ntBASIC21.83■■□□□ 1.09
SLC28A1O00337 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms