Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.97■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.97■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.96■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 FBXW4P1-201ENST00000426721 2239 ntBASIC19.96■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.96■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
BOLA2-SMG1P6H3BVE0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.95■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.95■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 SLC6A10P-202ENST00000431994 2058 ntBASIC19.95■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.95■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.95■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.94■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.94■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.94■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.94■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.94■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 AC026310.3-201ENST00000625186 2373 ntBASIC19.94■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.94■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.92■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.92■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.92■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.9■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.9■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.9■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
BOLA2-SMG1P6H3BVE0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.89■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 AL133380.1-201ENST00000506013 324 ntBASIC19.89■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.89■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 RARRES2P7-201ENST00000567349 469 ntBASIC19.89■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.88■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.88■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 AC242852.2-201ENST00000615738 1807 ntBASIC19.88■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
BOLA2-SMG1P6H3BVE0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms