Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPIPB4C9JG80 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
NPIPB4C9JG80 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPB4C9JG80 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPB4C9JG80 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.25■□□□□ 0.83
NPIPB4C9JG80 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPIPB4C9JG80 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPIPB4C9JG80 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NPIPB4C9JG80 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
NPIPB4C9JG80 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.24■□□□□ 0.83
NPIPB4C9JG80 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.24■□□□□ 0.83
NPIPB4C9JG80 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPIPB4C9JG80 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPIPB4C9JG80 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPIPB4C9JG80 AC021242.3-201ENST00000607598 1377 ntBASIC20.23■□□□□ 0.83
NPIPB4C9JG80 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPIPB4C9JG80 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.23■□□□□ 0.83
NPIPB4C9JG80 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPIPB4C9JG80 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.23■□□□□ 0.83
NPIPB4C9JG80 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPIPB4C9JG80 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPIPB4C9JG80 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPB4C9JG80 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPB4C9JG80 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPB4C9JG80 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPB4C9JG80 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPB4C9JG80 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.21■□□□□ 0.83
NPIPB4C9JG80 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NPIPB4C9JG80 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.21■□□□□ 0.83
NPIPB4C9JG80 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.21■□□□□ 0.83
NPIPB4C9JG80 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
NPIPB4C9JG80 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPB4C9JG80 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPB4C9JG80 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.21■□□□□ 0.83
NPIPB4C9JG80 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPB4C9JG80 DUSP8P3-201ENST00000399571 1760 ntBASIC20.21■□□□□ 0.83
NPIPB4C9JG80 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NPIPB4C9JG80 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.2■□□□□ 0.82
NPIPB4C9JG80 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPIPB4C9JG80 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPIPB4C9JG80 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NPIPB4C9JG80 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPIPB4C9JG80 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.2■□□□□ 0.82
NPIPB4C9JG80 BX664725.1-201ENST00000438252 379 ntBASIC20.2■□□□□ 0.82
NPIPB4C9JG80 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.2■□□□□ 0.82
NPIPB4C9JG80 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPIPB4C9JG80 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPIPB4C9JG80 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NPIPB4C9JG80 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NPIPB4C9JG80 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 MIR6722-201ENST00000617286 78 ntBASIC20.19■□□□□ 0.82
NPIPB4C9JG80 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 AC012676.1-201ENST00000574705 1949 ntBASIC20.19■□□□□ 0.82
NPIPB4C9JG80 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.19■□□□□ 0.82
NPIPB4C9JG80 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 Z92544.1-202ENST00000571933 1220 ntBASIC20.18■□□□□ 0.82
NPIPB4C9JG80 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.18■□□□□ 0.82
NPIPB4C9JG80 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.17■□□□□ 0.82
NPIPB4C9JG80 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.17■□□□□ 0.82
NPIPB4C9JG80 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms