Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 ANOS2P-203ENST00000472227 1816 ntBASIC20.96■□□□□ 0.95
CPSF4LA6NMK7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF4LA6NMK7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
CPSF4LA6NMK7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF4LA6NMK7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF4LA6NMK7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF4LA6NMK7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF4LA6NMK7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF4LA6NMK7 AC004987.1-201ENST00000428627 508 ntBASIC20.95■□□□□ 0.94
CPSF4LA6NMK7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF4LA6NMK7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CPSF4LA6NMK7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF4LA6NMK7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CPSF4LA6NMK7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.95■□□□□ 0.94
CPSF4LA6NMK7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF4LA6NMK7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.94■□□□□ 0.94
CPSF4LA6NMK7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF4LA6NMK7 AC131274.2-201ENST00000580697 1507 ntBASIC20.94■□□□□ 0.94
CPSF4LA6NMK7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CPSF4LA6NMK7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF4LA6NMK7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF4LA6NMK7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CPSF4LA6NMK7 ATP5G2P3-201ENST00000429083 425 ntBASIC20.94■□□□□ 0.94
CPSF4LA6NMK7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CPSF4LA6NMK7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.94■□□□□ 0.94
CPSF4LA6NMK7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.94■□□□□ 0.94
CPSF4LA6NMK7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF4LA6NMK7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF4LA6NMK7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.93■□□□□ 0.94
CPSF4LA6NMK7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF4LA6NMK7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.92■□□□□ 0.94
CPSF4LA6NMK7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.92■□□□□ 0.94
CPSF4LA6NMK7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CPSF4LA6NMK7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CPSF4LA6NMK7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.92■□□□□ 0.94
CPSF4LA6NMK7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CPSF4LA6NMK7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF4LA6NMK7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF4LA6NMK7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CPSF4LA6NMK7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF4LA6NMK7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF4LA6NMK7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF4LA6NMK7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
CPSF4LA6NMK7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CPSF4LA6NMK7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.91■□□□□ 0.94
CPSF4LA6NMK7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF4LA6NMK7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.91■□□□□ 0.94
CPSF4LA6NMK7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.9■□□□□ 0.94
CPSF4LA6NMK7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF4LA6NMK7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF4LA6NMK7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.9■□□□□ 0.94
CPSF4LA6NMK7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF4LA6NMK7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF4LA6NMK7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF4LA6NMK7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF4LA6NMK7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.9■□□□□ 0.94
CPSF4LA6NMK7 AC120024.1-201ENST00000562672 995 ntBASIC20.9■□□□□ 0.94
CPSF4LA6NMK7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF4LA6NMK7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CPSF4LA6NMK7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
CPSF4LA6NMK7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPSF4LA6NMK7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.89■□□□□ 0.94
CPSF4LA6NMK7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPSF4LA6NMK7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPSF4LA6NMK7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.89■□□□□ 0.93
CPSF4LA6NMK7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.89■□□□□ 0.93
CPSF4LA6NMK7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPSF4LA6NMK7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPSF4LA6NMK7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.89■□□□□ 0.93
CPSF4LA6NMK7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPSF4LA6NMK7 PVT1_1.1-201ENST00000615125 194 ntBASIC20.89■□□□□ 0.93
CPSF4LA6NMK7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPSF4LA6NMK7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.89■□□□□ 0.93
CPSF4LA6NMK7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 AC010980.1-201ENST00000587192 1142 ntBASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms