Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SPDYE4A6NLX3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SPDYE4A6NLX3 LINC00565-201ENST00000562710 2331 ntBASIC25.31■■□□□ 1.64
SPDYE4A6NLX3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.3■■□□□ 1.64
SPDYE4A6NLX3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPDYE4A6NLX3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
SPDYE4A6NLX3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPDYE4A6NLX3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPDYE4A6NLX3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.3■■□□□ 1.64
SPDYE4A6NLX3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.3■■□□□ 1.64
SPDYE4A6NLX3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.3■■□□□ 1.64
SPDYE4A6NLX3 AC137630.3-201ENST00000607245 391 ntBASIC25.3■■□□□ 1.64
SPDYE4A6NLX3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SPDYE4A6NLX3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.29■■□□□ 1.64
SPDYE4A6NLX3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.29■■□□□ 1.64
SPDYE4A6NLX3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.29■■□□□ 1.64
SPDYE4A6NLX3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SPDYE4A6NLX3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SPDYE4A6NLX3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
SPDYE4A6NLX3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.28■■□□□ 1.64
SPDYE4A6NLX3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPDYE4A6NLX3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SPDYE4A6NLX3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SPDYE4A6NLX3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPDYE4A6NLX3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPDYE4A6NLX3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPDYE4A6NLX3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.28■■□□□ 1.64
SPDYE4A6NLX3 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC25.28■■□□□ 1.64
SPDYE4A6NLX3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPDYE4A6NLX3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPDYE4A6NLX3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.27■■□□□ 1.64
SPDYE4A6NLX3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SPDYE4A6NLX3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
SPDYE4A6NLX3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
SPDYE4A6NLX3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.27■■□□□ 1.64
SPDYE4A6NLX3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.27■■□□□ 1.64
SPDYE4A6NLX3 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.27■■□□□ 1.64
SPDYE4A6NLX3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.27■■□□□ 1.64
SPDYE4A6NLX3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.27■■□□□ 1.64
SPDYE4A6NLX3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SPDYE4A6NLX3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SPDYE4A6NLX3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
SPDYE4A6NLX3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SPDYE4A6NLX3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SPDYE4A6NLX3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.26■■□□□ 1.63
SPDYE4A6NLX3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.26■■□□□ 1.63
SPDYE4A6NLX3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
SPDYE4A6NLX3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
SPDYE4A6NLX3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SPDYE4A6NLX3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
SPDYE4A6NLX3 AC142472.1-201ENST00000612013 1741 ntBASIC25.25■■□□□ 1.63
SPDYE4A6NLX3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SPDYE4A6NLX3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SPDYE4A6NLX3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.25■■□□□ 1.63
SPDYE4A6NLX3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
SPDYE4A6NLX3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SPDYE4A6NLX3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.24■■□□□ 1.63
SPDYE4A6NLX3 AC021242.3-201ENST00000607598 1377 ntBASIC25.24■■□□□ 1.63
SPDYE4A6NLX3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
SPDYE4A6NLX3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
SPDYE4A6NLX3 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
SPDYE4A6NLX3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.24■■□□□ 1.63
SPDYE4A6NLX3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
SPDYE4A6NLX3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.24■■□□□ 1.63
SPDYE4A6NLX3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SPDYE4A6NLX3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SPDYE4A6NLX3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SPDYE4A6NLX3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.23■■□□□ 1.63
SPDYE4A6NLX3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SPDYE4A6NLX3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SPDYE4A6NLX3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.23■■□□□ 1.63
SPDYE4A6NLX3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.23■■□□□ 1.63
SPDYE4A6NLX3 AC092028.1-203ENST00000608262 953 ntBASIC25.23■■□□□ 1.63
SPDYE4A6NLX3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.23■■□□□ 1.63
SPDYE4A6NLX3 AC010501.1-201ENST00000606270 1962 ntBASIC25.23■■□□□ 1.63
SPDYE4A6NLX3 SLC25A24-204ENST00000569674 2357 ntBASIC25.23■■□□□ 1.63
SPDYE4A6NLX3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
SPDYE4A6NLX3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
SPDYE4A6NLX3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPDYE4A6NLX3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SPDYE4A6NLX3 AL117328.2-201ENST00000624617 1940 ntBASIC25.22■■□□□ 1.63
SPDYE4A6NLX3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.22■■□□□ 1.63
SPDYE4A6NLX3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.22■■□□□ 1.63
SPDYE4A6NLX3 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.22■■□□□ 1.63
SPDYE4A6NLX3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
SPDYE4A6NLX3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPDYE4A6NLX3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPDYE4A6NLX3 EP400NL-214ENST00000641289 2402 ntBASIC25.22■■□□□ 1.63
SPDYE4A6NLX3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.21■■□□□ 1.63
SPDYE4A6NLX3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SPDYE4A6NLX3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SPDYE4A6NLX3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
SPDYE4A6NLX3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
SPDYE4A6NLX3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
SPDYE4A6NLX3 AC096887.2-201ENST00000623443 1957 ntBASIC25.2■■□□□ 1.63
SPDYE4A6NLX3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SPDYE4A6NLX3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.2■■□□□ 1.62
SPDYE4A6NLX3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.2■■□□□ 1.62
SPDYE4A6NLX3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.2■■□□□ 1.62
SPDYE4A6NLX3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms