Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 AC034268.1-201ENST00000441047 882 ntBASIC23.28■■□□□ 1.32
SHISA7A6NL88 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.28■■□□□ 1.32
SHISA7A6NL88 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SHISA7A6NL88 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SHISA7A6NL88 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.28■■□□□ 1.32
SHISA7A6NL88 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SHISA7A6NL88 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHISA7A6NL88 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
SHISA7A6NL88 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.27■■□□□ 1.32
SHISA7A6NL88 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SHISA7A6NL88 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.27■■□□□ 1.32
SHISA7A6NL88 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.27■■□□□ 1.32
SHISA7A6NL88 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SHISA7A6NL88 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.27■■□□□ 1.32
SHISA7A6NL88 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SHISA7A6NL88 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SHISA7A6NL88 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHISA7A6NL88 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.26■■□□□ 1.31
SHISA7A6NL88 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SHISA7A6NL88 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.26■■□□□ 1.31
SHISA7A6NL88 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.26■■□□□ 1.31
SHISA7A6NL88 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SHISA7A6NL88 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.26■■□□□ 1.31
SHISA7A6NL88 AL022069.1-201ENST00000568025 1636 ntBASIC23.26■■□□□ 1.31
SHISA7A6NL88 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHISA7A6NL88 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SHISA7A6NL88 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHISA7A6NL88 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.25■■□□□ 1.31
SHISA7A6NL88 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHISA7A6NL88 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHISA7A6NL88 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.25■■□□□ 1.31
SHISA7A6NL88 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHISA7A6NL88 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.25■■□□□ 1.31
SHISA7A6NL88 DUX4L2-201ENST00000561772 1275 ntBASIC23.25■■□□□ 1.31
SHISA7A6NL88 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SHISA7A6NL88 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.25■■□□□ 1.31
SHISA7A6NL88 AC009086.3-201ENST00000623486 1008 ntBASIC23.25■■□□□ 1.31
SHISA7A6NL88 DUX4L6-201ENST00000626483 1275 ntBASIC23.25■■□□□ 1.31
SHISA7A6NL88 DUX4L1-201ENST00000627662 1275 ntBASIC23.25■■□□□ 1.31
SHISA7A6NL88 DUX4L8-201ENST00000629013 1275 ntBASIC23.25■■□□□ 1.31
SHISA7A6NL88 DUX4L3-201ENST00000630187 1275 ntBASIC23.25■■□□□ 1.31
SHISA7A6NL88 DUX4L7-201ENST00000630678 1275 ntBASIC23.25■■□□□ 1.31
SHISA7A6NL88 DUX4L5-201ENST00000630834 1275 ntBASIC23.25■■□□□ 1.31
SHISA7A6NL88 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHISA7A6NL88 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.25■■□□□ 1.31
SHISA7A6NL88 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SHISA7A6NL88 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SHISA7A6NL88 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SHISA7A6NL88 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SHISA7A6NL88 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHISA7A6NL88 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.24■■□□□ 1.31
SHISA7A6NL88 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHISA7A6NL88 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
SHISA7A6NL88 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHISA7A6NL88 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.24■■□□□ 1.31
SHISA7A6NL88 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SHISA7A6NL88 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SHISA7A6NL88 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SHISA7A6NL88 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SHISA7A6NL88 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.23■■□□□ 1.31
SHISA7A6NL88 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SHISA7A6NL88 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.23■■□□□ 1.31
SHISA7A6NL88 YBX1P1-201ENST00000445822 960 ntBASIC23.23■■□□□ 1.31
SHISA7A6NL88 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SHISA7A6NL88 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SHISA7A6NL88 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.23■■□□□ 1.31
SHISA7A6NL88 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.22■■□□□ 1.31
SHISA7A6NL88 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SHISA7A6NL88 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SHISA7A6NL88 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.22■■□□□ 1.31
SHISA7A6NL88 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.22■■□□□ 1.31
SHISA7A6NL88 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.22■■□□□ 1.31
SHISA7A6NL88 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.22■■□□□ 1.31
SHISA7A6NL88 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.22■■□□□ 1.31
SHISA7A6NL88 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.22■■□□□ 1.31
SHISA7A6NL88 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SHISA7A6NL88 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.21■■□□□ 1.31
SHISA7A6NL88 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.21■■□□□ 1.31
SHISA7A6NL88 AL137784.2-201ENST00000607332 1000 ntBASIC23.21■■□□□ 1.31
SHISA7A6NL88 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHISA7A6NL88 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SHISA7A6NL88 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.21■■□□□ 1.31
SHISA7A6NL88 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SHISA7A6NL88 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SHISA7A6NL88 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.21■■□□□ 1.31
SHISA7A6NL88 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
SHISA7A6NL88 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
SHISA7A6NL88 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHISA7A6NL88 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
SHISA7A6NL88 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SHISA7A6NL88 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SHISA7A6NL88 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SHISA7A6NL88 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.2■■□□□ 1.3
SHISA7A6NL88 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SHISA7A6NL88 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.2■■□□□ 1.3
SHISA7A6NL88 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.2■■□□□ 1.3
SHISA7A6NL88 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHISA7A6NL88 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SHISA7A6NL88 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SHISA7A6NL88 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms