Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM9A6NGZ8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.48■□□□□ 0.23
SMIM9A6NGZ8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM9A6NGZ8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM9A6NGZ8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM9A6NGZ8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM9A6NGZ8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.47■□□□□ 0.23
SMIM9A6NGZ8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM9A6NGZ8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.47■□□□□ 0.23
SMIM9A6NGZ8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.47■□□□□ 0.23
SMIM9A6NGZ8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMIM9A6NGZ8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.46■□□□□ 0.23
SMIM9A6NGZ8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.46■□□□□ 0.23
SMIM9A6NGZ8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMIM9A6NGZ8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMIM9A6NGZ8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMIM9A6NGZ8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMIM9A6NGZ8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.46■□□□□ 0.23
SMIM9A6NGZ8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMIM9A6NGZ8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM9A6NGZ8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM9A6NGZ8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM9A6NGZ8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM9A6NGZ8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SMIM9A6NGZ8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SMIM9A6NGZ8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM9A6NGZ8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.43■□□□□ 0.22
SMIM9A6NGZ8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM9A6NGZ8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM9A6NGZ8 MIR3621-201ENST00000580529 85 ntBASIC16.43■□□□□ 0.22
SMIM9A6NGZ8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.43■□□□□ 0.22
SMIM9A6NGZ8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.43■□□□□ 0.22
SMIM9A6NGZ8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM9A6NGZ8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM9A6NGZ8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.42■□□□□ 0.22
SMIM9A6NGZ8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SMIM9A6NGZ8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.42■□□□□ 0.22
SMIM9A6NGZ8 AL117332.1-201ENST00000622628 974 ntBASIC16.42■□□□□ 0.22
SMIM9A6NGZ8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.42■□□□□ 0.22
SMIM9A6NGZ8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM9A6NGZ8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.42■□□□□ 0.22
SMIM9A6NGZ8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.42■□□□□ 0.22
SMIM9A6NGZ8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM9A6NGZ8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SMIM9A6NGZ8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM9A6NGZ8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM9A6NGZ8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SMIM9A6NGZ8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM9A6NGZ8 AC131212.1-201ENST00000613771 668 ntBASIC16.41■□□□□ 0.22
SMIM9A6NGZ8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.41■□□□□ 0.22
SMIM9A6NGZ8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.41■□□□□ 0.22
SMIM9A6NGZ8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM9A6NGZ8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM9A6NGZ8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.41■□□□□ 0.22
SMIM9A6NGZ8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM9A6NGZ8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.41■□□□□ 0.22
SMIM9A6NGZ8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM9A6NGZ8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SMIM9A6NGZ8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM9A6NGZ8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM9A6NGZ8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SMIM9A6NGZ8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM9A6NGZ8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM9A6NGZ8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SMIM9A6NGZ8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM9A6NGZ8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM9A6NGZ8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SMIM9A6NGZ8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.39■□□□□ 0.21
SMIM9A6NGZ8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM9A6NGZ8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM9A6NGZ8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms