Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
HFM1A2PYH4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
HFM1A2PYH4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC34.11■■■■□ 3.05
HFM1A2PYH4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC34.11■■■■□ 3.05
HFM1A2PYH4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC34.11■■■■□ 3.05
HFM1A2PYH4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC34.1■■■■□ 3.05
HFM1A2PYH4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC34.1■■■■□ 3.05
HFM1A2PYH4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
HFM1A2PYH4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC34.1■■■■□ 3.05
HFM1A2PYH4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC34.1■■■■□ 3.05
HFM1A2PYH4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
HFM1A2PYH4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC34.09■■■■□ 3.05
HFM1A2PYH4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC34.09■■■■□ 3.05
HFM1A2PYH4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC34.09■■■■□ 3.05
HFM1A2PYH4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC34.08■■■■□ 3.05
HFM1A2PYH4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC34.08■■■■□ 3.05
HFM1A2PYH4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC34.08■■■■□ 3.05
HFM1A2PYH4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC34.08■■■■□ 3.05
HFM1A2PYH4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
HFM1A2PYH4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC34.07■■■■□ 3.05
HFM1A2PYH4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC34.07■■■■□ 3.04
HFM1A2PYH4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC34.07■■■■□ 3.04
HFM1A2PYH4 AC009102.2-201ENST00000606772 1639 ntBASIC34.07■■■■□ 3.04
HFM1A2PYH4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC34.07■■■■□ 3.04
HFM1A2PYH4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC34.06■■■■□ 3.04
HFM1A2PYH4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
HFM1A2PYH4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
HFM1A2PYH4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
HFM1A2PYH4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
HFM1A2PYH4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
HFM1A2PYH4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
HFM1A2PYH4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
HFM1A2PYH4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
HFM1A2PYH4 C17orf82-201ENST00000623772 1530 ntBASIC34.05■■■■□ 3.04
HFM1A2PYH4 LINC01124-201ENST00000409786 2117 ntBASIC34.05■■■■□ 3.04
HFM1A2PYH4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
HFM1A2PYH4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC34.05■■■■□ 3.04
HFM1A2PYH4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC34.04■■■■□ 3.04
HFM1A2PYH4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC34.04■■■■□ 3.04
HFM1A2PYH4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
HFM1A2PYH4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC34.04■■■■□ 3.04
HFM1A2PYH4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC34.04■■■■□ 3.04
HFM1A2PYH4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
HFM1A2PYH4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC34.04■■■■□ 3.04
HFM1A2PYH4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
HFM1A2PYH4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC34.04■■■■□ 3.04
HFM1A2PYH4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC34.03■■■■□ 3.04
HFM1A2PYH4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
HFM1A2PYH4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC34.03■■■■□ 3.04
HFM1A2PYH4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
HFM1A2PYH4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC34.03■■■■□ 3.04
HFM1A2PYH4 AC110285.6-201ENST00000617652 491 ntBASIC34.03■■■■□ 3.04
HFM1A2PYH4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC34.03■■■■□ 3.04
HFM1A2PYH4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC34.02■■■■□ 3.04
HFM1A2PYH4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC34.02■■■■□ 3.04
HFM1A2PYH4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
HFM1A2PYH4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC34.01■■■■□ 3.04
HFM1A2PYH4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
HFM1A2PYH4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
HFM1A2PYH4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
HFM1A2PYH4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC34.01■■■■□ 3.03
HFM1A2PYH4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC34.01■■■■□ 3.03
HFM1A2PYH4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC34■■■■□ 3.03
HFM1A2PYH4 MIR935-201ENST00000401179 91 ntBASIC34■■■■□ 3.03
HFM1A2PYH4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC34■■■■□ 3.03
HFM1A2PYH4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC34■■■■□ 3.03
HFM1A2PYH4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC33.99■■■■□ 3.03
HFM1A2PYH4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
HFM1A2PYH4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC33.99■■■■□ 3.03
HFM1A2PYH4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC33.99■■■■□ 3.03
HFM1A2PYH4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC33.99■■■■□ 3.03
HFM1A2PYH4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC33.99■■■■□ 3.03
HFM1A2PYH4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC33.99■■■■□ 3.03
HFM1A2PYH4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC33.98■■■■□ 3.03
HFM1A2PYH4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
HFM1A2PYH4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC33.97■■■■□ 3.03
HFM1A2PYH4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
HFM1A2PYH4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
HFM1A2PYH4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
HFM1A2PYH4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC33.97■■■■□ 3.03
HFM1A2PYH4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC33.97■■■■□ 3.03
HFM1A2PYH4 SRD5A1P1-201ENST00000442297 786 ntBASIC33.96■■■■□ 3.03
HFM1A2PYH4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC33.96■■■■□ 3.03
HFM1A2PYH4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
HFM1A2PYH4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC33.96■■■■□ 3.03
HFM1A2PYH4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
HFM1A2PYH4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
HFM1A2PYH4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
HFM1A2PYH4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC33.96■■■■□ 3.03
HFM1A2PYH4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
HFM1A2PYH4 AC004812.2-201ENST00000611079 2094 ntBASIC33.95■■■■□ 3.03
HFM1A2PYH4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC33.95■■■■□ 3.03
HFM1A2PYH4 MIR638-201ENST00000385237 100 ntBASIC33.95■■■■□ 3.02
HFM1A2PYH4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC33.95■■■■□ 3.02
HFM1A2PYH4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC33.95■■■■□ 3.02
HFM1A2PYH4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC33.95■■■■□ 3.02
HFM1A2PYH4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
HFM1A2PYH4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC33.94■■■■□ 3.02
HFM1A2PYH4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
HFM1A2PYH4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC33.94■■■■□ 3.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms