Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
TCRBV5S1A1TA0A578 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.94■■□□□ 1.42
TCRBV5S1A1TA0A578 DUSP8P5-201ENST00000422884 1815 ntBASIC23.94■■□□□ 1.42
TCRBV5S1A1TA0A578 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
TCRBV5S1A1TA0A578 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
TCRBV5S1A1TA0A578 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.94■■□□□ 1.42
TCRBV5S1A1TA0A578 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TCRBV5S1A1TA0A578 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.94■■□□□ 1.42
TCRBV5S1A1TA0A578 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TCRBV5S1A1TA0A578 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TCRBV5S1A1TA0A578 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.93■■□□□ 1.42
TCRBV5S1A1TA0A578 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.93■■□□□ 1.42
TCRBV5S1A1TA0A578 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TCRBV5S1A1TA0A578 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV5S1A1TA0A578 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
TCRBV5S1A1TA0A578 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.92■■□□□ 1.42
TCRBV5S1A1TA0A578 ANOS2P-203ENST00000472227 1816 ntBASIC23.92■■□□□ 1.42
TCRBV5S1A1TA0A578 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV5S1A1TA0A578 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
TCRBV5S1A1TA0A578 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV5S1A1TA0A578 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
TCRBV5S1A1TA0A578 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
TCRBV5S1A1TA0A578 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.92■■□□□ 1.42
TCRBV5S1A1TA0A578 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TCRBV5S1A1TA0A578 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TCRBV5S1A1TA0A578 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.91■■□□□ 1.42
TCRBV5S1A1TA0A578 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.91■■□□□ 1.42
TCRBV5S1A1TA0A578 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.91■■□□□ 1.42
TCRBV5S1A1TA0A578 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TCRBV5S1A1TA0A578 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
TCRBV5S1A1TA0A578 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.91■■□□□ 1.42
TCRBV5S1A1TA0A578 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TCRBV5S1A1TA0A578 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.91■■□□□ 1.42
TCRBV5S1A1TA0A578 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.91■■□□□ 1.42
TCRBV5S1A1TA0A578 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV5S1A1TA0A578 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV5S1A1TA0A578 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TCRBV5S1A1TA0A578 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.9■■□□□ 1.42
TCRBV5S1A1TA0A578 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
TCRBV5S1A1TA0A578 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV5S1A1TA0A578 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.9■■□□□ 1.42
TCRBV5S1A1TA0A578 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV5S1A1TA0A578 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV5S1A1TA0A578 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV5S1A1TA0A578 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV5S1A1TA0A578 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV5S1A1TA0A578 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
TCRBV5S1A1TA0A578 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TCRBV5S1A1TA0A578 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TCRBV5S1A1TA0A578 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TCRBV5S1A1TA0A578 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
TCRBV5S1A1TA0A578 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
TCRBV5S1A1TA0A578 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TCRBV5S1A1TA0A578 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.89■■□□□ 1.41
TCRBV5S1A1TA0A578 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TCRBV5S1A1TA0A578 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TCRBV5S1A1TA0A578 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
TCRBV5S1A1TA0A578 AC092068.2-201ENST00000590491 1708 ntBASIC23.89■■□□□ 1.41
TCRBV5S1A1TA0A578 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.89■■□□□ 1.41
TCRBV5S1A1TA0A578 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.41
TCRBV5S1A1TA0A578 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TCRBV5S1A1TA0A578 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
TCRBV5S1A1TA0A578 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TCRBV5S1A1TA0A578 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TCRBV5S1A1TA0A578 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TCRBV5S1A1TA0A578 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TCRBV5S1A1TA0A578 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.88■■□□□ 1.41
TCRBV5S1A1TA0A578 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.88■■□□□ 1.41
TCRBV5S1A1TA0A578 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TCRBV5S1A1TA0A578 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
TCRBV5S1A1TA0A578 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.87■■□□□ 1.41
TCRBV5S1A1TA0A578 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.87■■□□□ 1.41
TCRBV5S1A1TA0A578 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.87■■□□□ 1.41
TCRBV5S1A1TA0A578 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV5S1A1TA0A578 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
TCRBV5S1A1TA0A578 AL451085.2-201ENST00000605085 799 ntBASIC23.87■■□□□ 1.41
TCRBV5S1A1TA0A578 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV5S1A1TA0A578 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.87■■□□□ 1.41
TCRBV5S1A1TA0A578 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV5S1A1TA0A578 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
TCRBV5S1A1TA0A578 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV5S1A1TA0A578 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV5S1A1TA0A578 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV5S1A1TA0A578 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV5S1A1TA0A578 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV5S1A1TA0A578 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV5S1A1TA0A578 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.86■■□□□ 1.41
TCRBV5S1A1TA0A578 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV5S1A1TA0A578 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.85■■□□□ 1.41
TCRBV5S1A1TA0A578 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
TCRBV5S1A1TA0A578 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV5S1A1TA0A578 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV5S1A1TA0A578 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV5S1A1TA0A578 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV5S1A1TA0A578 BX664725.1-201ENST00000438252 379 ntBASIC23.85■■□□□ 1.41
TCRBV5S1A1TA0A578 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.85■■□□□ 1.41
TCRBV5S1A1TA0A578 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TCRBV5S1A1TA0A578 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.85■■□□□ 1.41
TCRBV5S1A1TA0A578 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.85■■□□□ 1.41
TCRBV5S1A1TA0A578 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms