Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.69■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.68■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.68■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.68■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.68■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.67■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.67■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.67■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.66■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.66■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 MIR6089-201ENST00000616698 64 ntBASIC22.66■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.65■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.65■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MSANTD3-TMEFF1A0A0A6YYJ0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 AC034268.1-201ENST00000441047 882 ntBASIC22.64■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 AC126544.1-201ENST00000580842 1059 ntBASIC22.64■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.64■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 IKBKGP1-201ENST00000612193 1073 ntBASIC22.64■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.63■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.63■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.62■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.62■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.62■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 AC090192.1-201ENST00000517740 490 ntBASIC22.62■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.62■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.62■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 AC022517.1-201ENST00000592429 346 ntBASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 pRNA.6-201ENST00000610482 90 ntBASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 pRNA.5-201ENST00000612139 90 ntBASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 pRNA.11-201ENST00000618423 90 ntBASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 pRNA.13-201ENST00000619112 90 ntBASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 RARRES2P11-201ENST00000635158 484 ntBASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.61■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 AL121749.1-202ENST00000609313 2153 ntBASIC22.6■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.6■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.6■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.6■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.59■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 AL031602.1-201ENST00000633169 911 ntBASIC22.59■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.59■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms