Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
TRAV9-1A0A075B6T8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV9-1A0A075B6T8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV9-1A0A075B6T8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TRAV9-1A0A075B6T8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV9-1A0A075B6T8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV9-1A0A075B6T8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV9-1A0A075B6T8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV9-1A0A075B6T8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV9-1A0A075B6T8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV9-1A0A075B6T8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV9-1A0A075B6T8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 C11orf96-202ENST00000528572 1834 ntBASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-1A0A075B6T8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV9-1A0A075B6T8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV9-1A0A075B6T8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV9-1A0A075B6T8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAV9-1A0A075B6T8 CAHM-201ENST00000604200 896 ntBASIC17.14■□□□□ 0.33
TRAV9-1A0A075B6T8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAV9-1A0A075B6T8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV9-1A0A075B6T8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 RARRES2P7-201ENST00000567349 469 ntBASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRAV9-1A0A075B6T8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 AC092053.2-201ENST00000640557 1818 ntBASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV9-1A0A075B6T8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV9-1A0A075B6T8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAV9-1A0A075B6T8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV9-1A0A075B6T8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRAV9-1A0A075B6T8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV9-1A0A075B6T8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV9-1A0A075B6T8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV9-1A0A075B6T8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV9-1A0A075B6T8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV9-1A0A075B6T8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV9-1A0A075B6T8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV9-1A0A075B6T8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV9-1A0A075B6T8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV9-1A0A075B6T8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV9-1A0A075B6T8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV9-1A0A075B6T8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV9-1A0A075B6T8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms