Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 AC015818.8-201ENST00000587907 1519 ntBASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 AP001267.2-201ENST00000532619 2086 ntBASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 AC006504.5-208ENST00000588784 2401 ntBASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 AC139712.1-201ENST00000378256 1875 ntBASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAI2Q9Y5P3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 CICP12-201ENST00000455801 843 ntBASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 AC027601.3-201ENST00000622907 509 ntBASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 AC244452.3-201ENST00000636814 210 ntBASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 E2F3P2-201ENST00000447755 1422 ntBASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 AL590440.2-201ENST00000641973 1595 ntBASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI2Q9Y5P3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 AC097359.2-201ENST00000604992 2389 ntBASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
RAI2Q9Y5P3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms