Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 AP002414.1-201ENST00000391405 1147 ntBASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 AC005181.1-201ENST00000604782 1256 ntBASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 MAMDC2-201ENST00000377182 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 NFIB-206ENST00000397575 2869 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 KBTBD6-201ENST00000379485 5178 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 ASAH1-202ENST00000314146 1690 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 AC092117.2-201ENST00000623937 1659 ntBASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 CCDC18-201ENST00000343253 4867 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 TMEFF2-202ENST00000392314 2842 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 AL353593.1-201ENST00000602517 3955 ntBASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 ZSCAN2-207ENST00000448803 3813 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 TTLL2-201ENST00000239587 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 WBP11-201ENST00000261167 4646 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 RN7SL832P-201ENST00000607781 1756 ntBASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 PTOV1-AS1-202ENST00000600742 3181 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 SLC14A2-201ENST00000255226 4746 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 RGL4-210ENST00000615003 3014 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 STK16-204ENST00000409638 2868 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CNGB1-204ENST00000564448 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CELF4-203ENST00000420428 4052 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 TFCP2L1-201ENST00000263707 9292 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CYP4F62P-202ENST00000439137 2144 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 TEP1-209ENST00000556935 7643 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 TRMT12-201ENST00000328599 2207 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 TATDN2P2-201ENST00000403590 2226 ntBASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 IRS3P-201ENST00000223076 1006 ntBASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 NT5C3AP1-201ENST00000394500 1012 ntBASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms