Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 C8orf49-201ENST00000525043 1968 ntBASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZIC4Q8N9L1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 BRWD1P1-201ENST00000401091 371 ntBASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 AC244107.1-201ENST00000442033 332 ntBASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 RNMTL1P1-201ENST00000454103 560 ntBASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 TUBB8P8-201ENST00000458717 1058 ntBASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 AC021723.1-201ENST00000486306 515 ntBASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 AC005962.1-201ENST00000584100 773 ntBASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 AC009884.2-201ENST00000603110 324 ntBASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.97□□□□□ -0.33
ZIC4Q8N9L1 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 AL161932.2-201ENST00000435436 679 ntBASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 RPL18P13-201ENST00000478088 569 ntBASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 AC108725.1-201ENST00000495472 409 ntBASIC12.96□□□□□ -0.33
ZIC4Q8N9L1 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms