Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 AP006294.1-201ENST00000415407 339 ntBASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 POM121L8P-201ENST00000417732 1281 ntBASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 POM121L9P-203ENST00000441984 1285 ntBASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 AC106760.1-201ENST00000508690 800 ntBASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 ENPP7P14-201ENST00000621765 1040 ntBASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00346Q8IVM7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 AC010327.5-201ENST00000586923 3061 ntBASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 RN7SL832P-201ENST00000607781 1756 ntBASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 ACTG1P3-201ENST00000431775 1114 ntBASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 FKBP4P6-201ENST00000457486 1332 ntBASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms