Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 C1QBPP1-201ENST00000400117 770 ntBASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 SOCS2P1-201ENST00000417727 557 ntBASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 NUS1P3-201ENST00000423502 862 ntBASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 AC124283.3-201ENST00000570869 594 ntBASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 SAMD11P1-201ENST00000571429 661 ntBASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 CTBP2P3-201ENST00000585629 1255 ntBASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 KRT8P22-201ENST00000562317 1415 ntBASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 DGCR5-201ENST00000399539 862 ntBASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 AL359711.2-201ENST00000563105 872 ntBASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 AC025048.6-201ENST00000634326 1161 ntBASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATPAF1Q5TC12 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms