Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RBM48Q5RL73 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.48□□□□□ -0.25
RBM48Q5RL73 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
RBM48Q5RL73 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.48□□□□□ -0.25
RBM48Q5RL73 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.48□□□□□ -0.25
RBM48Q5RL73 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 AL136172.1-201ENST00000598590 1394 ntBASIC13.47□□□□□ -0.25
RBM48Q5RL73 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 AC015688.4-201ENST00000580780 1647 ntBASIC13.47□□□□□ -0.25
RBM48Q5RL73 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 AC145285.3-201ENST00000564603 959 ntBASIC13.47□□□□□ -0.25
RBM48Q5RL73 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 AL133215.2-201ENST00000609242 977 ntBASIC13.47□□□□□ -0.25
RBM48Q5RL73 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.47□□□□□ -0.25
RBM48Q5RL73 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RBM48Q5RL73 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.47□□□□□ -0.25
RBM48Q5RL73 AC131902.2-201ENST00000566892 2172 ntBASIC13.47□□□□□ -0.25
RBM48Q5RL73 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 MEX3B-202ENST00000558133 4333 ntBASIC13.46□□□□□ -0.25
RBM48Q5RL73 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RBM48Q5RL73 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RBM48Q5RL73 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RBM48Q5RL73 UXT-AS1-201ENST00000590504 1525 ntBASIC13.46□□□□□ -0.25
RBM48Q5RL73 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RBM48Q5RL73 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RBM48Q5RL73 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 AL645937.2-201ENST00000396808 931 ntBASIC13.46□□□□□ -0.25
RBM48Q5RL73 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 AC079140.1-201ENST00000508039 487 ntBASIC13.46□□□□□ -0.25
RBM48Q5RL73 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RBM48Q5RL73 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 AC025048.3-201ENST00000590609 569 ntBASIC13.46□□□□□ -0.25
RBM48Q5RL73 AC104692.2-201ENST00000603054 253 ntBASIC13.46□□□□□ -0.25
RBM48Q5RL73 AC026120.1-201ENST00000611536 926 ntBASIC13.46□□□□□ -0.25
RBM48Q5RL73 AC005702.4-201ENST00000618393 416 ntBASIC13.46□□□□□ -0.25
RBM48Q5RL73 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms