Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 SLC25A24P2-201ENST00000415059 510 ntBASIC20.15■□□□□ 0.82
CDCA8Q53HL2 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 AC024681.1-201ENST00000521917 487 ntBASIC20.15■□□□□ 0.82
CDCA8Q53HL2 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 AC015802.1-201ENST00000588104 1449 ntBASIC20.15■□□□□ 0.82
CDCA8Q53HL2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 AC090505.1-201ENST00000430515 1834 ntBASIC20.15■□□□□ 0.82
CDCA8Q53HL2 STK26-204ENST00000481105 1835 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA8Q53HL2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDCA8Q53HL2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CDCA8Q53HL2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDCA8Q53HL2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CDCA8Q53HL2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 LAP3P2-201ENST00000454686 1454 ntBASIC20.14■□□□□ 0.81
CDCA8Q53HL2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 TSPY25P-201ENST00000429463 745 ntBASIC20.14■□□□□ 0.81
CDCA8Q53HL2 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 MYO15B-237ENST00000642007 4893 ntBASIC20.14■□□□□ 0.81
CDCA8Q53HL2 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 AC140479.7-201ENST00000636301 2332 ntBASIC20.14■□□□□ 0.81
CDCA8Q53HL2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA8Q53HL2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 AC008132.1-202ENST00000342005 1389 ntBASIC20.13■□□□□ 0.81
CDCA8Q53HL2 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 NCR3-202ENST00000376071 541 ntTSL 5 BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA8Q53HL2 ACTG1P2-201ENST00000415776 1125 ntBASIC20.13■□□□□ 0.81
CDCA8Q53HL2 ACTG1P11-201ENST00000425411 1125 ntBASIC20.13■□□□□ 0.81
CDCA8Q53HL2 ISCA2P1-201ENST00000425548 448 ntBASIC20.13■□□□□ 0.81
CDCA8Q53HL2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms