Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC090510.3-201ENST00000615831 821 ntBASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 PYY2-201ENST00000315776 282 ntBASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 KRT8P1-201ENST00000557533 1207 ntBASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 AC013553.1-201ENST00000560906 267 ntBASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 RN7SL602P-201ENST00000578326 324 ntBASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 RN7SL718P-201ENST00000581254 303 ntBASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 PSME2-217ENST00000615264 874 ntTSL 5 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 AL450487.2-201ENST00000615934 407 ntBASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 AC020922.4-201ENST00000621389 339 ntBASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 AC009145.4-201ENST00000625119 1294 ntBASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 PSME2-218ENST00000630027 185 ntTSL 3 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.1□□□□□ -0.15
RSPO4Q2I0M5 HLF-202ENST00000430986 1385 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 DBET-201ENST00000630918 3363 ntBASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 AP000354.1-201ENST00000396982 456 ntBASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 OR2R1P-201ENST00000441404 914 ntBASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 BCRP4-201ENST00000506079 804 ntBASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 MIR4254-201ENST00000581063 76 ntBASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO4Q2I0M5 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms