Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 AL360270.3-201ENST00000609118 1348 ntBASIC11.38□□□□□ -0.59
HIST1H1AQ02539 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 TPT1P11-201ENST00000458482 498 ntBASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 DOC2GP-202ENST00000514950 1163 ntBASIC11.38□□□□□ -0.59
HIST1H1AQ02539 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 AC107373.2-201ENST00000607735 490 ntBASIC11.38□□□□□ -0.59
HIST1H1AQ02539 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 AC004840.1-201ENST00000636359 365 ntBASIC11.38□□□□□ -0.59
HIST1H1AQ02539 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HIST1H1AQ02539 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 NUTM2HP-201ENST00000442076 2498 ntBASIC11.37□□□□□ -0.59
HIST1H1AQ02539 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HIST1H1AQ02539 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms