Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 MESTP3-201ENST00000503460 968 ntBASIC14.23□□□□□ -0.13
HMGCS1Q01581 TDH-203ENST00000531764 1110 ntBASIC14.23□□□□□ -0.13
HMGCS1Q01581 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 MIR5189-201ENST00000577370 114 ntBASIC14.23□□□□□ -0.13
HMGCS1Q01581 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 AC025048.6-201ENST00000634326 1161 ntBASIC14.23□□□□□ -0.13
HMGCS1Q01581 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.23□□□□□ -0.13
HMGCS1Q01581 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 AC020910.6-201ENST00000623084 1459 ntBASIC14.23□□□□□ -0.13
HMGCS1Q01581 BEND3P1-201ENST00000421591 1944 ntBASIC14.23□□□□□ -0.13
HMGCS1Q01581 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 AL138709.1-201ENST00000614840 1693 ntBASIC14.23□□□□□ -0.13
HMGCS1Q01581 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCS1Q01581 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGCS1Q01581 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 FKBP4P6-201ENST00000457486 1332 ntBASIC14.22□□□□□ -0.13
HMGCS1Q01581 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 PTENP1-202ENST00000532280 3996 ntBASIC14.22□□□□□ -0.13
HMGCS1Q01581 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 ACTG1P3-201ENST00000431775 1114 ntBASIC14.22□□□□□ -0.13
HMGCS1Q01581 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 AL391280.1-201ENST00000506969 1062 ntBASIC14.22□□□□□ -0.13
HMGCS1Q01581 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 PTP4A1P2-201ENST00000546033 454 ntBASIC14.22□□□□□ -0.13
HMGCS1Q01581 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 AC010319.3-201ENST00000597028 470 ntBASIC14.22□□□□□ -0.13
HMGCS1Q01581 AC138466.3-201ENST00000619983 221 ntBASIC14.22□□□□□ -0.13
HMGCS1Q01581 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 AC009093.2-202ENST00000620513 2079 ntBASIC14.22□□□□□ -0.13
HMGCS1Q01581 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGCS1Q01581 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCS1Q01581 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms