Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RHBDL3P58872 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RHBDL3P58872 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RHBDL3P58872 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RHBDL3P58872 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RHBDL3P58872 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RHBDL3P58872 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RHBDL3P58872 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RHBDL3P58872 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.16■□□□□ 0.34
RHBDL3P58872 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RHBDL3P58872 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RHBDL3P58872 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.16■□□□□ 0.34
RHBDL3P58872 AC022447.6-201ENST00000515522 438 ntBASIC17.16■□□□□ 0.34
RHBDL3P58872 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.16■□□□□ 0.34
RHBDL3P58872 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RHBDL3P58872 AC023824.1-201ENST00000562945 2975 ntBASIC17.16■□□□□ 0.34
RHBDL3P58872 MIR6074-201ENST00000612054 107 ntBASIC17.16■□□□□ 0.34
RHBDL3P58872 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RHBDL3P58872 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RHBDL3P58872 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RHBDL3P58872 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
RHBDL3P58872 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RHBDL3P58872 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
RHBDL3P58872 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.16■□□□□ 0.34
RHBDL3P58872 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.16■□□□□ 0.34
RHBDL3P58872 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RHBDL3P58872 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RHBDL3P58872 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.15■□□□□ 0.34
RHBDL3P58872 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RHBDL3P58872 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
RHBDL3P58872 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.15■□□□□ 0.34
RHBDL3P58872 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.15■□□□□ 0.34
RHBDL3P58872 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.15■□□□□ 0.34
RHBDL3P58872 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RHBDL3P58872 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 MIR645-201ENST00000385283 94 ntBASIC17.15■□□□□ 0.34
RHBDL3P58872 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.15■□□□□ 0.34
RHBDL3P58872 AC073869.2-201ENST00000417338 1026 ntBASIC17.15■□□□□ 0.34
RHBDL3P58872 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.15■□□□□ 0.34
RHBDL3P58872 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.15■□□□□ 0.34
RHBDL3P58872 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 RN7SL81P-201ENST00000493781 261 ntBASIC17.15■□□□□ 0.34
RHBDL3P58872 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.15■□□□□ 0.34
RHBDL3P58872 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.15■□□□□ 0.34
RHBDL3P58872 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.15■□□□□ 0.34
RHBDL3P58872 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.15■□□□□ 0.34
RHBDL3P58872 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RHBDL3P58872 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.15■□□□□ 0.34
RHBDL3P58872 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDL3P58872 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RHBDL3P58872 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RHBDL3P58872 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.15■□□□□ 0.34
RHBDL3P58872 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RHBDL3P58872 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
RHBDL3P58872 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDL3P58872 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
RHBDL3P58872 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.14■□□□□ 0.33
RHBDL3P58872 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDL3P58872 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RHBDL3P58872 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDL3P58872 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RHBDL3P58872 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.14■□□□□ 0.33
RHBDL3P58872 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RHBDL3P58872 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDL3P58872 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.14■□□□□ 0.33
RHBDL3P58872 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RHBDL3P58872 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RHBDL3P58872 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDL3P58872 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDL3P58872 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDL3P58872 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.14■□□□□ 0.33
RHBDL3P58872 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.14■□□□□ 0.33
RHBDL3P58872 RPL18AP3-201ENST00000462885 528 ntBASIC17.14■□□□□ 0.33
RHBDL3P58872 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.14■□□□□ 0.33
RHBDL3P58872 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.14■□□□□ 0.33
RHBDL3P58872 TMCO5B-205ENST00000530020 894 ntBASIC17.14■□□□□ 0.33
RHBDL3P58872 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.14■□□□□ 0.33
RHBDL3P58872 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RHBDL3P58872 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDL3P58872 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.14■□□□□ 0.33
RHBDL3P58872 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.14■□□□□ 0.33
RHBDL3P58872 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RHBDL3P58872 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.14■□□□□ 0.33
RHBDL3P58872 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDL3P58872 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms