Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
CLDN12P56749 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
CLDN12P56749 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN12P56749 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN12P56749 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CLDN12P56749 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CLDN12P56749 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CLDN12P56749 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN12P56749 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN12P56749 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN12P56749 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN12P56749 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN12P56749 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN12P56749 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN12P56749 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CLDN12P56749 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN12P56749 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.87□□□□□ -0.35
CLDN12P56749 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN12P56749 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN12P56749 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
CLDN12P56749 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CLDN12P56749 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 AC215219.1-201ENST00000400706 1817 ntBASIC12.87□□□□□ -0.35
CLDN12P56749 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CLDN12P56749 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CLDN12P56749 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN12P56749 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN12P56749 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN12P56749 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN12P56749 AC011840.2-201ENST00000563063 1520 ntBASIC12.87□□□□□ -0.35
CLDN12P56749 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN12P56749 AL138799.1-201ENST00000448213 1675 ntBASIC12.86□□□□□ -0.35
CLDN12P56749 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDN12P56749 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CLDN12P56749 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDN12P56749 AC090643.2-201ENST00000623442 2029 ntBASIC12.86□□□□□ -0.35
CLDN12P56749 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDN12P56749 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CLDN12P56749 CLK3P2-201ENST00000427566 1453 ntBASIC12.86□□□□□ -0.35
CLDN12P56749 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CLDN12P56749 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDN12P56749 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDN12P56749 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.86□□□□□ -0.35
CLDN12P56749 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CLDN12P56749 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.86□□□□□ -0.35
CLDN12P56749 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
CLDN12P56749 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDN12P56749 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDN12P56749 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDN12P56749 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDN12P56749 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDN12P56749 AC107373.2-201ENST00000607735 490 ntBASIC12.86□□□□□ -0.35
CLDN12P56749 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CLDN12P56749 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDN12P56749 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDN12P56749 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.86□□□□□ -0.35
CLDN12P56749 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
CLDN12P56749 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDN12P56749 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CLDN12P56749 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN12P56749 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDN12P56749 AC004241.5-201ENST00000623870 2448 ntBASIC12.86□□□□□ -0.35
CLDN12P56749 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms