Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH6P55285 AC136759.1-202ENST00000530858 2194 ntBASIC15.35■□□□□ 0.05
CDH6P55285 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
CDH6P55285 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDH6P55285 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH6P55285 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 AL354989.2-201ENST00000435838 1540 ntBASIC15.35■□□□□ 0.05
CDH6P55285 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.35■□□□□ 0.05
CDH6P55285 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH6P55285 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 ALG3P1-201ENST00000508806 1114 ntBASIC15.35■□□□□ 0.05
CDH6P55285 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH6P55285 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
CDH6P55285 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH6P55285 KRT90P-201ENST00000549264 1064 ntBASIC15.35■□□□□ 0.05
CDH6P55285 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH6P55285 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH6P55285 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH6P55285 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.35■□□□□ 0.05
CDH6P55285 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.35■□□□□ 0.05
CDH6P55285 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH6P55285 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH6P55285 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH6P55285 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH6P55285 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH6P55285 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH6P55285 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 AC090505.1-201ENST00000430515 1834 ntBASIC15.35■□□□□ 0.05
CDH6P55285 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH6P55285 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH6P55285 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH6P55285 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CDH6P55285 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CDH6P55285 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDH6P55285 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH6P55285 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDH6P55285 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH6P55285 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH6P55285 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 AC004945.1-201ENST00000416738 983 ntBASIC15.34■□□□□ 0.05
CDH6P55285 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH6P55285 PUDPP3-201ENST00000445368 636 ntBASIC15.34■□□□□ 0.05
CDH6P55285 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CDH6P55285 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH6P55285 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH6P55285 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH6P55285 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH6P55285 AC106886.1-201ENST00000568660 600 ntBASIC15.34■□□□□ 0.05
CDH6P55285 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH6P55285 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDH6P55285 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH6P55285 AC006453.4-201ENST00000636949 1252 ntBASIC15.34■□□□□ 0.05
CDH6P55285 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH6P55285 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CDH6P55285 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
CDH6P55285 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 AL928921.2-201ENST00000641325 2442 ntBASIC15.34■□□□□ 0.05
CDH6P55285 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDH6P55285 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDH6P55285 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH6P55285 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.33■□□□□ 0.05
CDH6P55285 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms