Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.73□□□□□ -0.37
HCFC1P51610 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HCFC1P51610 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
HCFC1P51610 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HCFC1P51610 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HCFC1P51610 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HCFC1P51610 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.72□□□□□ -0.37
HCFC1P51610 SCARNA12-201ENST00000459155 270 ntBASIC12.72□□□□□ -0.37
HCFC1P51610 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.72□□□□□ -0.37
HCFC1P51610 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.72□□□□□ -0.37
HCFC1P51610 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.72□□□□□ -0.37
HCFC1P51610 MIR3180-2-201ENST00000581748 88 ntBASIC12.72□□□□□ -0.37
HCFC1P51610 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HCFC1P51610 MIR6858-201ENST00000620733 67 ntBASIC12.72□□□□□ -0.37
HCFC1P51610 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
HCFC1P51610 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.72□□□□□ -0.37
HCFC1P51610 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.72□□□□□ -0.37
HCFC1P51610 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.72□□□□□ -0.37
HCFC1P51610 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 LINC00552-201ENST00000625151 2579 ntBASIC12.72□□□□□ -0.37
HCFC1P51610 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.72□□□□□ -0.37
HCFC1P51610 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 AL035414.1-201ENST00000451327 857 ntBASIC12.72□□□□□ -0.37
HCFC1P51610 AC018463.1-201ENST00000456674 917 ntBASIC12.72□□□□□ -0.37
HCFC1P51610 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HCFC1P51610 AC103810.10-201ENST00000606504 343 ntBASIC12.72□□□□□ -0.37
HCFC1P51610 AC009145.4-201ENST00000625119 1294 ntBASIC12.72□□□□□ -0.37
HCFC1P51610 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
HCFC1P51610 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HCFC1P51610 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HCFC1P51610 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HCFC1P51610 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.72□□□□□ -0.37
HCFC1P51610 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.72□□□□□ -0.37
HCFC1P51610 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HCFC1P51610 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.71□□□□□ -0.37
HCFC1P51610 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.71□□□□□ -0.37
HCFC1P51610 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.71□□□□□ -0.37
HCFC1P51610 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
HCFC1P51610 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.71□□□□□ -0.37
HCFC1P51610 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.71□□□□□ -0.37
HCFC1P51610 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.71□□□□□ -0.37
HCFC1P51610 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.71□□□□□ -0.37
HCFC1P51610 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.71□□□□□ -0.37
HCFC1P51610 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.71□□□□□ -0.37
HCFC1P51610 AC234644.1-201ENST00000406065 370 ntBASIC12.71□□□□□ -0.37
HCFC1P51610 AL512306.1-201ENST00000432698 848 ntBASIC12.71□□□□□ -0.37
HCFC1P51610 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.71□□□□□ -0.37
HCFC1P51610 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC12.71□□□□□ -0.37
HCFC1P51610 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.71□□□□□ -0.37
HCFC1P51610 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.71□□□□□ -0.37
HCFC1P51610 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.71□□□□□ -0.37
HCFC1P51610 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
HCFC1P51610 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HCFC1P51610 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.71□□□□□ -0.37
HCFC1P51610 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
HCFC1P51610 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.71□□□□□ -0.38
HCFC1P51610 AC007686.3-201ENST00000619017 3487 ntBASIC12.71□□□□□ -0.38
HCFC1P51610 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HCFC1P51610 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms